RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 GALNT7Q86SF2 657 aa17.25■□□□□ 0.35
UBE3D-203ENST00000369747 LONP2Q86WA8 852 aa17.25■□□□□ 0.35
UBE3D-203ENST00000369747 CILP2Q8IUL8 1156 aa17.25■□□□□ 0.35
UBE3D-203ENST00000369747 KDM1BQ8NB78 822 aa17.25■□□□□ 0.35
UBE3D-203ENST00000369747 GRIN3AQ8TCU5 1115 aa17.25■□□□□ 0.35
UBE3D-203ENST00000369747 NXNL1Q96CM4 212 aa17.25■□□□□ 0.35
UBE3D-203ENST00000369747 RILPQ96NA2 401 aa17.25■□□□□ 0.35
UBE3D-203ENST00000369747 MIPEPQ99797 713 aa17.25■□□□□ 0.35
UBE3D-203ENST00000369747 GATA5Q9BWX5 397 aaPredicted RBP17.25■□□□□ 0.35
UBE3D-203ENST00000369747 TDRD1Q9BXT4 1180 aaKnown RBP17.25■□□□□ 0.35
UBE3D-203ENST00000369747 BDP1A6H8Y1 2624 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 CCDC22O60826 627 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 H2AFYO75367 372 aaKnown RBP17.24■□□□□ 0.35
UBE3D-203ENST00000369747 KLHL2O95198 593 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 PRLP01236 227 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 SERPINA6P08185 405 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 HNRNPLP14866 589 aaKnown RBP eCLIP17.24■□□□□ 0.35
UBE3D-203ENST00000369747 DRD1P21728 446 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 SLC14A2Q15849 920 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 C9orf64Q5T6V5 341 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 SREK1Q8WXA9 508 aaKnown RBP17.24■□□□□ 0.35
UBE3D-203ENST00000369747 SCYL1Q96KG9 808 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 NDNQ99608 321 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 OLFM1Q99784 485 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 DNAJC28Q9NX36 388 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.24■□□□□ 0.35
UBE3D-203ENST00000369747 NDRG2Q9UN36 371 aaKnown RBP17.24■□□□□ 0.35
UBE3D-203ENST00000369747 ARL5AQ9Y689 179 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 STON1Q9Y6Q2 735 aa17.24■□□□□ 0.35
UBE3D-203ENST00000369747 A0A087X1B8 175 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 KRBA1A5PL33 1030 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 OR51F1A6NGY5 319 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 POP4O95707 220 aaKnown RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 EPHX1P07099 455 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 CTSLP07711 333 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 RECQLP46063 649 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 CLCN5P51795 746 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 BCL2L1Q07817 233 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 CCINQ13939 588 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 RALGPS1Q5JS13 557 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 LIPMQ5VYY2 423 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 PLPP6Q8IY26 295 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 SPATA6LQ8N4H0 392 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 ZNF781Q8N8C0 355 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 OR6P1Q8NGX9 317 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 GABPB2Q8TAK5 448 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 BLOC1S5Q8TDH9 187 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 SMIM14Q96QK8 99 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 CCDC106Q9BWC9 280 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 MARCH4Q9P2E8 410 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 XPR1Q9UBH6 696 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 PCDHB9Q9Y5E1 797 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 WASF2Q9Y6W5 498 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 HSPA4LO95757 839 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 NDST3O95803 873 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 ESRRAP11474 423 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 IDH3AP50213 366 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 ALDH18A1P54886 795 aaKnown RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 PRAMEP78395 509 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 ENPP2Q13822 863 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 PTPRCAPQ14761 206 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 RINLQ6ZS11 566 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 LDB1Q86U70 411 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 STK40Q8N2I9 435 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 IL17RCQ8NAC3 791 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 BRSK1Q8TDC3 778 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 PEX13Q92968 403 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 MOCOSQ96EN8 888 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 TBATAQ96M53 351 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 NECAB3Q96P71 396 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 BTBD10Q9BSF8 475 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 CADM1Q9BY67 442 aaKnown RBP17.23■□□□□ 0.35
UBE3D-203ENST00000369747 FAM96AQ9H5X1 160 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 ATP13A3Q9H7F0 1226 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 CD248Q9HCU0 757 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 MUTYHQ9UIF7 546 aa17.23■□□□□ 0.35
UBE3D-203ENST00000369747 EDDM13A0A1B0GTR0 161 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 LEFTY1O75610 366 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 S1PR4O95977 384 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 UGT2B4P06133 528 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 PIRTP0C851 137 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 MAPK8P45983 427 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 SLC12A2P55011 1212 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 PTPRRQ15256 657 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 TSNAXIP1Q2TAA8 658 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 ARSIQ5FYB1 569 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 ZSWIM9Q86XI8 627 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 SPNS2Q8IVW8 549 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 LMNTD2Q8IXW0 634 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 MAGEC3Q8TD91 643 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 HEXDCQ8WVB3 486 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 MSANTD3Q96H12 275 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 DNAJC1Q96KC8 554 aaKnown RBP17.22■□□□□ 0.35
UBE3D-203ENST00000369747 HEPHQ9BQS7 1158 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 CPEB1Q9BZB8 566 aaKnown RBP17.22■□□□□ 0.35
UBE3D-203ENST00000369747 UNKQ9C0B0 810 aaKnown RBP17.22■□□□□ 0.35
UBE3D-203ENST00000369747 CDH19Q9H159 772 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 SUDS3Q9H7L9 328 aaPredicted RBP17.22■□□□□ 0.35
UBE3D-203ENST00000369747 IGSF5Q9NSI5 407 aa17.22■□□□□ 0.35
UBE3D-203ENST00000369747 SARDHQ9UL12 918 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms