RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SMIM11AP58511 58 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 XKR6Q5GH73 641 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 DENND6AQ8IWF6 608 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 PHTF2Q8N3S3 785 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 ZNF384Q8TF68 577 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 YME1L1Q96TA2 773 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 ZNF490Q9ULM2 529 aaPredicted RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 PMF1-BGLAPU3KQ54 211 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 DLDP09622 509 aaKnown RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 SERPINA4P29622 427 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 GNA12Q03113 381 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 ELAVL2Q12926 359 aaKnown RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 MOGSQ13724 837 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 TSSK3Q96PN8 268 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 CHCHD6Q9BRQ6 235 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 ABHD16BQ9H3Z7 469 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 TLL2Q9Y6L7 1015 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 AQP12BA6NM10 295 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 ZNF157P51786 506 aaPredicted RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 FBXO48Q5FWF7 155 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 USP45Q70EL2 814 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 AQP12AQ8IXF9 295 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 MINDY2Q8NBR6 621 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 ZNF516Q92618 1163 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 KAT8Q9H7Z6 458 aaKnown RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 LRTM1Q9HBL6 345 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 ANKDD1BA6NHY2 528 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 NOBOXO60393 691 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 SCELO95171 688 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 NR2F6P10588 404 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 UROSP10746 265 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 CYP2A13Q16696 494 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 C5orf22Q49AR2 442 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 INTS6LQ5JSJ4 861 aaKnown RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 KRT74Q7RTS7 529 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 RNF180Q86T96 592 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 PHACTR4Q8IZ21 702 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 ANKRD49Q8WVL7 239 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 CANT1Q8WVQ1 401 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 MAGEB10Q96LZ2 347 aaPredicted RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 OSGEPL1Q9H4B0 414 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 LIN28AQ9H9Z2 209 aaKnown RBP15.85■□□□□ 0.13
COL17A1-202ENST00000369733 CMTM6Q9NX76 183 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 WDR37Q9Y2I8 494 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 TRPV2Q9Y5S1 764 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 PEX16Q9Y5Y5 336 aa15.85■□□□□ 0.13
COL17A1-202ENST00000369733 PDLIM1O00151 329 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 CYP7B1O75881 506 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 PPIBP23284 216 aaKnown RBP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 GRIA1P42261 906 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 NDUFAF6Q330K2 333 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 SH3BP5LQ7L8J4 393 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 RELL1Q8IUW5 271 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 USP7Q93009 1102 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 SP140LQ9H930 580 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 COL20A1Q9P218 1284 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 IGSF9Q9P2J2 1179 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 SUCOQ9UBS9 1254 aaKnown RBP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 KLHL18O94889 574 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 SLC6A2P23975 617 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 PSMA3P25788 255 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 ASPAP45381 313 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 YAP1P46937 504 aaKnown RBP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 ABATP80404 500 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 ANXA8L1Q5VT79 327 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 ZNF544Q6NX49 715 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 PACRGLQ8N7B6 248 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 ATL1Q8WXF7 558 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 CIPCQ9C0C6 399 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 TEX264Q9Y6I9 313 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 MTHFD1P11586 935 aaKnown RBP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 AQP1P29972 269 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 CNSTQ6PJW8 725 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 OR4A15Q8NGL6 344 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 HIPK3Q9H422 1215 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 OAZ3Q9UMX2 235 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 CXCL11O14625 94 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 ARMC6Q6NXE6 501 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 TRIM40Q6P9F5 258 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 CYP20A1Q6UW02 462 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 OOSP2Q86WS3 158 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 DCBLD1Q8N8Z6 715 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 DRAXINQ8NBI3 349 aaPredicted RBP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 PPP1R13LQ8WUF5 828 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 ZCCHC2Q9C0B9 1178 aaKnown RBP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 IFT172Q9UG01 1749 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 CCDC162PA2VCL2 907 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 HOXA2O43364 376 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 CYP2A6P11509 494 aaPredicted RBP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 CCNCP24863 283 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 PTPN5P54829 565 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 TAS2R39P59534 338 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 TRIM48Q8IWZ4 208 aa15.84■□□□□ 0.13
COL17A1-202ENST00000369733 PDGFDQ9GZP0 370 aaPredicted RBP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL17A1-202ENST00000369733 NRCAMQ92823 1304 aa15.83■□□□□ 0.13
COL17A1-202ENST00000369733 FAM240BA0A1B0GVZ2 78 aa15.83■□□□□ 0.13
COL17A1-202ENST00000369733 CASKO14936 926 aa15.83■□□□□ 0.13
COL17A1-202ENST00000369733 RAP2AP10114 183 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms