RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 SLC30A3Q99726 388 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 ZMYM5Q9UJ78 669 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 NYNRINQ9P2P1 1898 aaKnown RBP13.74□□□□□ -0.21
SHC1-202ENST00000368445 CHEK2O96017 543 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 GLUD1P00367 558 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 UGT2B4P06133 528 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 OGNP20774 298 aaKnown RBP13.74□□□□□ -0.21
SHC1-202ENST00000368445 CPOXP36551 454 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 CTSOP43234 321 aaPredicted RBP13.74□□□□□ -0.21
SHC1-202ENST00000368445 LMAN2Q12907 356 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 ZNF678Q5SXM1 525 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 PAOXQ6QHF9 649 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.74□□□□□ -0.21
SHC1-202ENST00000368445 FBXW8Q8N3Y1 598 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 FAR2Q96K12 515 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 RTKNQ9BST9 563 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 ZNF711Q9Y462 761 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 GREB1Q4ZG55 1949 aa13.74□□□□□ -0.21
SHC1-202ENST00000368445 CCDC189A1A4V9 331 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PABPN1LA6NDY0 278 aaKnown RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 AZIN1O14977 448 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 ECI2O75521 394 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 FDXRP22570 491 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 XPAP23025 273 aaPredicted RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 RAP1GDS1P52306 607 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 HERVK_113P63132 956 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 SH3BP2P78314 561 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 UNC50Q53HI1 259 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 LPCAT4Q643R3 524 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 ISLR2Q6UXK2 745 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 TMEM150AQ86TG1 271 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 SERPINA9Q86WD7 417 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 CLYBLQ8N0X4 340 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 OR6Y1Q8NGX8 325 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 TMEM106CQ9BVX2 250 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 ERVK-6Q9BXR3 956 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 C11orf49Q9H6J7 331 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PIDD1Q9HB75 910 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 STX18Q9P2W9 335 aaKnown RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 CD84Q9UIB8 345 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PTPRDP23468 1912 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PIP5K1BO14986 540 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PER2O15055 1255 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 IGSF6O95976 241 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 HGFP14210 728 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 ITGALP20701 1170 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PPP3CCP48454 512 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 ZNF140P52738 457 aaPredicted RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 FOXA1P55317 472 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 AARS2Q5JTZ9 985 aaKnown RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 CYP2R1Q6VVX0 501 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 KLHDC8BQ8IXV7 354 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 ZNF366Q8N895 744 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 LPGAT1Q92604 370 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 TRIM43Q96BQ3 446 aaPredicted RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 C19orf60Q96EN9 201 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 SLC45A3Q96JT2 553 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 TRIB3Q96RU7 358 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 ACOX2Q99424 681 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 SLC39A3Q9BRY0 314 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 MCM8Q9UJA3 840 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 RPL26L1Q9UNX3 145 aaKnown RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 CCL26Q9Y258 94 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 NLRC5Q86WI3 1866 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 KNL1Q8NG31 2342 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 SYCE1LA8MT33 242 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 LEFTY2O00292 366 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PRMT5O14744 637 aaPredicted RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 ALOX15P16050 662 aaPredicted RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 AKT1P31749 480 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PIK3CGP48736 1102 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 CREB5Q02930 508 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 CLCQ05315 142 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 RALGDSQ12967 914 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PITRM1Q5JRX3 1037 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 CCDC149Q6ZUS6 474 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 PPWD1Q96BP3 646 aaKnown RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 TCEAL4Q96EI5 215 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 C1orf50Q9BV19 199 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 BOCQ9BWV1 1114 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 ATP13A3Q9H7F0 1226 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.73□□□□□ -0.21
SHC1-202ENST00000368445 KIAA1522Q9P206 1035 aaPredicted RBP13.73□□□□□ -0.21
SHC1-202ENST00000368445 MIA3Q5JRA6 1907 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 MYOFQ9NZM1 2061 aa13.73□□□□□ -0.21
SHC1-202ENST00000368445 HIDE1A8MVS5 230 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 UBFD1O14562 309 aaKnown RBP13.72□□□□□ -0.21
SHC1-202ENST00000368445 TLL1O43897 1013 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 ZNF7P17097 686 aaPredicted RBP13.72□□□□□ -0.21
SHC1-202ENST00000368445 SYN1P17600 705 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 CES1P23141 567 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 SERPINA4P29622 427 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 NTHL1P78549 312 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 STX5Q13190 355 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 MPPE1Q53F39 396 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 FAM91A1Q658Y4 838 aa13.72□□□□□ -0.21
SHC1-202ENST00000368445 NCEH1Q6PIU2 408 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms