RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SRP72O76094 671 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 LCP1P13796 627 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 ATP6V1B1P15313 513 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 STMN1P16949 149 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 PAMP19021 973 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 WARSP23381 471 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 MYF6P23409 242 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 HTR7P34969 479 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 ADRA1BP35368 520 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 SLC26A3P40879 764 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 MRPL19P49406 292 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 ATXN1P54253 815 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 NAGLUP54802 743 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 PKNOX1P55347 436 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 POU4F1Q01851 419 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 CSTF1Q05048 431 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 BNIP2Q12982 314 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 PUM1Q14671 1186 aaKnown RBP eCLIP11.5□□□□□ -0.57
USF1-201ENST00000368019 USP10Q14694 798 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 ZBED5Q49AG3 693 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 COQ5Q5HYK3 327 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 IL23RQ5VWK5 629 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 C9orf57Q5W0N0 161 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 REP15Q6BDI9 236 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 KRT80Q6KB66 452 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 PKN3Q6P5Z2 889 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 ZNF852Q6ZMS4 543 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 Q6ZNX1 250 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 LPCAT2Q7L5N7 544 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 AMIGO2Q86SJ2 522 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 FAM131BQ86XD5 332 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 SLC22A9Q8IVM8 553 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 CENPLQ8N0S6 344 aaPredicted RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 FSTL5Q8N475 847 aaPredicted RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 DNAAF3Q8N9W5 541 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 CCNYQ8ND76 341 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 TSPEARQ8WU66 669 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 VPS50Q96JG6 964 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 SLC45A3Q96JT2 553 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 SCYL1Q96KG9 808 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 TEKT5Q96M29 485 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 ZSWIM3Q96MP5 696 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 GPR78Q96P69 363 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 AGAP2Q99490 1192 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 DOK1Q99704 481 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 CORO1BQ9BR76 489 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 DUSP16Q9BY84 665 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 COQ10BQ9H8M1 238 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 TRPV5Q9NQA5 729 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 IARS2Q9NSE4 1012 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 ZSCAN32Q9NX65 697 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 CACNA2D2Q9NY47 1150 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 TMEM9Q9P0T7 183 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 TMEM181Q9P2C4 612 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 AFF4Q9UHB7 1163 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 CROTQ9UKG9 612 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 SLC39A10Q9ULF5 831 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 RUVBL2Q9Y230 463 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 AAR2Q9Y312 384 aaKnown RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 DENND4CQ5VZ89 1909 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 H3BSA7 217 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 M0QZQ0 153 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 TK2O00142 265 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 NEMP1O14524 444 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 CFLARO15519 480 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 HTRA2O43464 458 aaPredicted RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 CBFA2T3O75081 653 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 OAZ2O95190 189 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 VNN2O95498 520 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 F9P00740 461 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 SNRPB2P08579 225 aaKnown RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 RBP1P09455 135 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 FCGR1AP12314 374 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 TDGF1P13385 188 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 IDO1P14902 403 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 ERCC2P18074 760 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 HMOX2P30519 316 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 CD68P34810 354 aaPredicted RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 ARPP19P56211 112 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 NME5P56597 212 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 TPI1P60174 286 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 NAA20P61599 178 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 MPP1Q00013 466 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 FOXM1Q08050 763 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 SLC14A2Q15849 920 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 ARL13BQ3SXY8 428 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 SV2CQ496J9 727 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 CTXN3Q4LDR2 81 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 NHSL2Q5HYW2 709 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 BSPRYQ5W0U4 402 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 KIAA0930Q6ICG6 404 aaPredicted RBP11.49□□□□□ -0.57
USF1-201ENST00000368019 VITQ6UXI7 678 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 DGLUCYQ7Z3D6 616 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 PYROXD2Q8N2H3 581 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 PCYOX1LQ8NBM8 494 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 APPL2Q8NEU8 664 aa11.49□□□□□ -0.57
USF1-201ENST00000368019 OR2T34Q8NGX1 318 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms