RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 SNRNP25Q9BV90 132 aaKnown RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 TMEM168Q9H0V1 697 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 PCDHB1Q9Y5F3 818 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 NDUFS2O75306 463 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 CSDE1O75534 798 aaKnown RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 SIM2Q14190 667 aaPredicted RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 MPPE1Q53F39 396 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 REPS2Q8NFH8 660 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 UFD1Q92890 307 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 UNC93B1Q9H1C4 597 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 EIF3KQ9UBQ5 218 aaKnown RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 TIMM13Q9Y5L4 95 aaPredicted RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 hCG_1818297A0A087WSY0 165 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 HNRNPLP14866 589 aaKnown RBP eCLIP16.68■□□□□ 0.261e-6■□□□□ 9.1
NID1-202ENST00000366595 CREMQ03060 361 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 GRM3Q14832 879 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 RNF220Q5VTB9 566 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 FRRS1Q6ZNA5 592 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 LRRC69Q6ZNQ3 347 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 PLEKHA1Q9HB21 404 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 LRTM1Q9HBL6 345 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 OR1I1O60431 355 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 HCN1O60741 890 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 KERAO60938 352 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 CLUP10909 449 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 PNLIPRP1P54315 467 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 DCDC1P59894 354 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 MFSD10Q14728 455 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 PCBP1Q15365 356 aaKnown RBP eCLIP16.68■□□□□ 0.261e-7■□□□□ 10.7
NID1-202ENST00000366595 NOL9Q5SY16 702 aaKnown RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 TUBGCP5Q96RT8 1024 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 A0A087X0B3 334 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 PITPNM1O00562 1244 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 PAPSS2O95340 614 aaPredicted RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 NELFEP18615 380 aaKnown RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 TPTEP56180 551 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 SLC39A12Q504Y0 691 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 MFSD5Q6N075 450 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 AHSA2Q719I0 299 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 FBXL16Q8N461 479 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 C11orf65Q8NCR3 313 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 PNPOQ9NVS9 261 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 TCRBV9S1A1TA0A576 114 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 ASLP04424 464 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 GRK5P34947 590 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 OAZ1P54368 228 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 S100A12P80511 92 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 CDK18Q07002 472 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 CBLBQ13191 982 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 PGM5Q15124 567 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 SMU1Q2TAY7 513 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 ZNF311Q5JNZ3 666 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 CHRDL2Q6WN34 429 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 TMEM17Q86X19 198 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 SPERTQ8NA61 448 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 AIF1LQ9BQI0 150 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 POMCP01189 267 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 YES1P07947 543 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 ITPKBP27987 946 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 SSR2P43308 183 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 GMPSP49915 693 aaPredicted RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 RORCP51449 518 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 PCDH1Q08174 1060 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 PRKD1Q15139 912 aaPredicted RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 FAM46CQ5VWP2 391 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 C17orf64Q86WR6 236 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 DNAAF5Q86Y56 855 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 SPPL2CQ8IUH8 684 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 HJURPQ8NCD3 748 aaPredicted RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 AP1S3Q96PC3 154 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 SEMA3CQ99985 751 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 GPATCH1Q9BRR8 931 aaKnown RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 ANXA2P2A6NMY6 339 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 DBIP07108 87 aaKnown RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 ANXA2P07355 339 aaKnown RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 ABL2P42684 1182 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 OR2B6P58173 313 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 BNIP1Q12981 228 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 SEC23AQ15436 765 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 FAM189A2Q15884 450 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 IFNLR1Q8IU57 520 aaPredicted RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 DNAJB8Q8NHS0 232 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 C9orf43Q8TAL5 461 aaPredicted RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 CLIP3Q96DZ5 547 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 GFM1Q96RP9 751 aaKnown RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 SLCO1B3Q9NPD5 702 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 C14orf105Q9NVL8 296 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 FBXO9Q9UK97 447 aaPredicted RBP16.67■□□□□ 0.26
NID1-202ENST00000366595 PLLPQ9Y342 182 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 SLC22A1O15245 554 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 CXCR3P49682 368 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 C9orf64Q5T6V5 341 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 FAAH2Q6GMR7 532 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 C16orf59Q7L2K0 433 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 ADGRG6Q86SQ4 1221 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 GALNT15Q8N3T1 639 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 RIT1Q92963 219 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 STARD7Q9NQZ5 370 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
NID1-202ENST00000366595 CDH7Q9ULB5 785 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms