RNA–Protein interactions for RNA: ENST00000366170.6

VSTM1-202, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-202ENST00000366170 ULK4Q96C45 1275 aa12.9□□□□□ -0.34
VSTM1-202ENST00000366170 ZIM3Q96PE6 472 aa12.9□□□□□ -0.34
VSTM1-202ENST00000366170 RUFY1Q96T51 708 aa12.9□□□□□ -0.34
VSTM1-202ENST00000366170 CPNE1Q99829 537 aa12.9□□□□□ -0.34
VSTM1-202ENST00000366170 C6orf106Q9H6K1 298 aaPredicted RBP12.9□□□□□ -0.34
VSTM1-202ENST00000366170 PRMT8Q9NR22 394 aaPredicted RBP12.9□□□□□ -0.34
VSTM1-202ENST00000366170 MARCH4Q9P2E8 410 aaPredicted RBP12.9□□□□□ -0.34
VSTM1-202ENST00000366170 FBXO4Q9UKT5 387 aa12.9□□□□□ -0.34
VSTM1-202ENST00000366170 SMIM23A6NLE4 172 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 GAPDHSO14556 408 aaPredicted RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 RASGRF2O14827 1237 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 SLC25A14O95258 325 aaPredicted RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 PCCBP05166 539 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 PRSS56P0CW18 603 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 OGNP20774 298 aaKnown RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 NUDT1P36639 197 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 RPL6Q02878 288 aaKnown RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 FGL2Q14314 439 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 EFTUD2Q15029 972 aaKnown RBP eCLIP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 HENMT1Q5T8I9 393 aaKnown RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 GRTP1Q5TC63 336 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 PSAPL1Q6NUJ1 521 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 PNCKQ6P2M8 343 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 LRIG3Q6UXM1 1119 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 KIAA0408Q6ZU52 694 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 CROCCP2Q86T23 111 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 WDR5BQ86VZ2 330 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 LONP2Q86WA8 852 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 SLC26A11Q86WA9 606 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 DENND6AQ8IWF6 608 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 DEFB119Q8N690 84 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 CADM4Q8NFZ8 388 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 BTN2A2Q8WVV5 523 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 SCG3Q8WXD2 468 aaKnown RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 LENG8Q96PV6 779 aaPredicted RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 PCED1AQ9H1Q7 454 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 ACBD3Q9H3P7 528 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 PPCSQ9HAB8 311 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 FBXO6Q9NRD1 293 aaPredicted RBP12.89□□□□□ -0.35
VSTM1-202ENST00000366170 FETUBQ9UGM5 382 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 SLC24A2Q9UI40 661 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 MUC3AQ02505 3323 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 SCN8AQ9UQD0 1980 aa12.89□□□□□ -0.35
VSTM1-202ENST00000366170 TRBV5-4A0A0C4DH59 114 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 METTL12A8MUP2 240 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 FPGTO14772 594 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 INPP4BO15327 924 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 TCEA3O75764 348 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 HAUS5O94927 633 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 S1PR4O95977 384 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 C1QAP02745 245 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 AHSGP02765 367 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 ZNF7P17097 686 aaPredicted RBP12.88□□□□□ -0.35
VSTM1-202ENST00000366170 HNRNPA2B1P22626 353 aaKnown RBP12.88□□□□□ -0.35
VSTM1-202ENST00000366170 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
VSTM1-202ENST00000366170 AKT2P31751 481 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 SPRP35270 261 aaPredicted RBP12.88□□□□□ -0.35
VSTM1-202ENST00000366170 GP5P40197 560 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 SLC1A2P43004 574 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 SLCO1A2P46721 670 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 SERPINB9P50453 376 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 MPP1Q00013 466 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 SEMA3AQ14563 771 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 INPP5AQ14642 412 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 CEP85LQ5SZL2 805 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 PACS1Q6VY07 963 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 CNTN4Q8IWV2 1026 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 PIANPQ8IYJ0 282 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 NXPE1Q8N323 547 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 PNPLA1Q8N8W4 532 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 TP53I13Q8NBR0 393 aaPredicted RBP12.88□□□□□ -0.35
VSTM1-202ENST00000366170 PLA2G15Q8NCC3 412 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 C2CD4AQ8NCU7 369 aaPredicted RBP12.88□□□□□ -0.35
VSTM1-202ENST00000366170 HEXDCQ8WVB3 486 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 SLC44A1Q8WWI5 657 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 SNX19Q92543 992 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 GLYATL1Q969I3 302 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 CENPTQ96BT3 561 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 BIRC7Q96CA5 298 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 DCUN1D1Q96GG9 259 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 VPS35Q96QK1 796 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 PAFAH2Q99487 392 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 COPS8Q99627 209 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 MYOCQ99972 504 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 TMEM109Q9BVC6 243 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 VIPAS39Q9H9C1 493 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 MBNL1Q9NR56 388 aaKnown RBP12.88□□□□□ -0.35
VSTM1-202ENST00000366170 ZDHHC3Q9NYG2 299 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 SLC17A6Q9P2U8 582 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 MBD1Q9UIS9 605 aaPredicted RBP12.88□□□□□ -0.35
VSTM1-202ENST00000366170 DMTF1Q9Y222 760 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 NFS1Q9Y697 457 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 BDP1A6H8Y1 2624 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 ABCA7Q8IZY2 2146 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 CEP192Q8TEP8 1941 aa12.88□□□□□ -0.35
VSTM1-202ENST00000366170 UBA6A0AVT1 1052 aaPredicted RBP12.87□□□□□ -0.35
VSTM1-202ENST00000366170 FAM86C2PA6NEL3 165 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms