RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 GSDMCQ9BYG8 508 aa7.62□□□□□ -1.19
SGMS1-201ENST00000361543 DPEP2Q9H4A9 486 aa7.62□□□□□ -1.19
SGMS1-201ENST00000361543 POLR1BQ9H9Y6 1135 aa7.62□□□□□ -1.19
SGMS1-201ENST00000361543 GLOD4Q9HC38 313 aa7.62□□□□□ -1.19
SGMS1-201ENST00000361543 TRNAU1APQ9NX07 287 aaKnown RBP7.62□□□□□ -1.19
SGMS1-201ENST00000361543 PKD2L2Q9NZM6 624 aa7.62□□□□□ -1.19
SGMS1-201ENST00000361543 SATB2Q9UPW6 733 aa7.62□□□□□ -1.19
SGMS1-201ENST00000361543 EFR3BQ9Y2G0 817 aa7.62□□□□□ -1.19
SGMS1-201ENST00000361543 REXO2Q9Y3B8 237 aaKnown RBP7.62□□□□□ -1.19
SGMS1-201ENST00000361543 RGSL1A5PLK6 1076 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 NTN3O00634 580 aaPredicted RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 RRP8O43159 456 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 MTSS1O43312 755 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 NUDT21O43809 227 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 PMPCBO75439 489 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 DXOO77932 396 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 MT-CYBP00156 380 aaPredicted RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 PIRTP0C851 137 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CTNNA2P26232 953 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 AK4P27144 223 aaPredicted RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 PTPN7P35236 360 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ADCY8P40145 1251 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 EIF2S3P41091 472 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ABCG1P45844 678 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 LSSP48449 732 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 SPINT3P49223 89 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 PCBP4P57723 403 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CCL7P80098 99 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CCZ1BP86790 482 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CCZ1P86791 482 aaPredicted RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CTBSQ01459 385 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CDK18Q07002 472 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 WASHC5Q12768 1159 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 PEX6Q13608 980 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 HLTFQ14527 1009 aaKnown RBP eCLIP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 TEX44Q53QW1 395 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 HENMT1Q5T8I9 393 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CCDC181Q5TID7 509 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 OGFOD3Q6PK18 319 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 LRRC69Q6ZNQ3 347 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 MARK2Q7KZI7 788 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 SPRED1Q7Z699 444 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ZC3H18Q86VM9 953 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 NLRP8Q86W28 1048 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 GALNT13Q8IUC8 556 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CCNJLQ8IV13 435 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 LSMEM2Q8N112 164 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 Q8N9G6 341 aaPredicted RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 LRRC57Q8N9N7 239 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 SPATA22Q8NHS9 363 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ZDHHC1Q8WTX9 485 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 FGF11Q92914 225 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 TADA1Q96BN2 335 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 SCARF2Q96GP6 870 aaPredicted RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 COX14Q96I36 57 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 TEKT5Q96M29 485 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ZNF578Q96N58 590 aaPredicted RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 OR2M4Q96R27 311 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 LACRTQ9GZZ8 138 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 FAM83DQ9H4H8 585 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ASCL3Q9NQ33 180 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 SPATS2LQ9NUQ6 558 aaKnown RBP7.61□□□□□ -1.19
SGMS1-201ENST00000361543 TAAR2Q9P1P5 351 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 VPS18Q9P253 973 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 APPL1Q9UKG1 709 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 GUCA1BQ9UMX6 200 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 TMEM98Q9Y2Y6 226 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ZNF711Q9Y462 761 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 PCDHA3Q9Y5H8 950 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ENTPD2Q9Y5L3 495 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 ST14Q9Y5Y6 855 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 RNF215Q9Y6U7 377 aa7.61□□□□□ -1.19
SGMS1-201ENST00000361543 CCDC187A0A096LP49 1063 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 A0A1W2PNU3 283 aaPredicted RBP7.6□□□□□ -1.19
SGMS1-201ENST00000361543 A0A1W2PQM1 296 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 PMS2P1A4D2B8 440 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 GRID2IPA4D2P6 1211 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 FADS2P1A8MWK0 482 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 HACD1B0YJ81 288 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 F5H423 210 aaPredicted RBP7.6□□□□□ -1.19
SGMS1-201ENST00000361543 APOC4-APOC2K7ER74 178 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 KIF5CO60282 957 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 TJP3O95049 919 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 ASMTLO95671 621 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 NDST3O95803 873 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 APOC2P02655 101 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 ATP1A1P05023 1023 aaKnown RBP7.6□□□□□ -1.19
SGMS1-201ENST00000361543 FGF1P05230 155 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 PNLIPP16233 465 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 NFKB1P19838 968 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 CD68P34810 354 aaPredicted RBP7.6□□□□□ -1.19
SGMS1-201ENST00000361543 ACTR1BP42025 376 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 TNNT3P45378 269 aaPredicted RBP7.6□□□□□ -1.19
SGMS1-201ENST00000361543 MAZP56270 477 aaKnown RBP7.6□□□□□ -1.19
SGMS1-201ENST00000361543 DCDC1P59894 354 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 ERVPABLB-1P60509 514 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 ACTR1AP61163 376 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 LRP8Q14114 963 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 PYCR3Q53H96 274 aa7.6□□□□□ -1.19
SGMS1-201ENST00000361543 ZNF569Q5MCW4 686 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms