RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 IYDQ6PHW0 289 aa20.93■□□□□ 0.94
CD47-202ENST00000361309 KDELC2Q7Z4H8 507 aa20.93■□□□□ 0.94
CD47-202ENST00000361309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.93■□□□□ 0.94
CD47-202ENST00000361309 ZPBPQ9BS86 351 aa20.93■□□□□ 0.94
CD47-202ENST00000361309 EFHD1Q9BUP0 239 aa20.93■□□□□ 0.94
CD47-202ENST00000361309 PCDH18Q9HCL0 1135 aa20.93■□□□□ 0.94
CD47-202ENST00000361309 AIPL1Q9NZN9 384 aa20.93■□□□□ 0.94
CD47-202ENST00000361309 KLHL3Q9UH77 587 aa20.93■□□□□ 0.94
CD47-202ENST00000361309 CHKBQ9Y259 395 aa20.93■□□□□ 0.94
CD47-202ENST00000361309 USP9YO00507 2555 aaPredicted RBP20.92■□□□□ 0.94
CD47-202ENST00000361309 STK17BO94768 372 aa20.92■□□□□ 0.94
CD47-202ENST00000361309 MAPK9P45984 424 aa20.92■□□□□ 0.94
CD47-202ENST00000361309 ABHD18Q0P651 414 aa20.92■□□□□ 0.94
CD47-202ENST00000361309 DEFB109BQ30KR1 87 aa20.92■□□□□ 0.94
CD47-202ENST00000361309 TRIM11Q96F44 468 aa20.92■□□□□ 0.94
CD47-202ENST00000361309 POLR1EQ9GZS1 481 aaKnown RBP20.92■□□□□ 0.94
CD47-202ENST00000361309 STN1Q9H668 368 aaKnown RBP20.92■□□□□ 0.94
CD47-202ENST00000361309 VPS18Q9P253 973 aa20.92■□□□□ 0.94
CD47-202ENST00000361309 CNOT6Q9ULM6 557 aaKnown RBP20.92■□□□□ 0.94
CD47-202ENST00000361309 KCNK6Q9Y257 313 aa20.92■□□□□ 0.94
CD47-202ENST00000361309 TMEM184BQ9Y519 407 aaPredicted RBP20.92■□□□□ 0.94
CD47-202ENST00000361309 CLDN7O95471 211 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 MYBL1P10243 752 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 DSC2Q02487 901 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 KLHL30Q0D2K2 578 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 ATP1A1-AS1Q5TC04 95 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 SLC9B2Q86UD5 537 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 AOPEPQ8N6M6 819 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 TEKT4Q8WW24 435 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 APOBEC4Q8WW27 367 aaKnown RBP20.91■□□□□ 0.94
CD47-202ENST00000361309 STARD8Q92502 1023 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 SH3KBP1Q96B97 665 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 ABHD17AQ96GS6 310 aa20.91■□□□□ 0.94
CD47-202ENST00000361309 TRIT1Q9H3H1 467 aaKnown RBP20.91■□□□□ 0.94
CD47-202ENST00000361309 USP9XQ93008 2570 aaPredicted RBP20.9■□□□□ 0.94
CD47-202ENST00000361309 POLR1CO15160 346 aaPredicted RBP20.9■□□□□ 0.94
CD47-202ENST00000361309 SNX2O60749 519 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 SKILP12757 684 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 ACP5P13686 325 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 PRKCIP41743 596 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 MMRN1Q13201 1228 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 PIGHQ14442 188 aaPredicted RBP20.9■□□□□ 0.94
CD47-202ENST00000361309 C16orf46Q6P387 395 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 LRRC49Q8IUZ0 686 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 WDR24Q96S15 920 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 HERPUD2Q9BSE4 406 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 TBC1D10AQ9BXI6 508 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 TDRD1Q9BXT4 1180 aaKnown RBP20.9■□□□□ 0.94
CD47-202ENST00000361309 ISCUQ9H1K1 167 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 RTN4Q9NQC3 1192 aaKnown RBP20.9■□□□□ 0.94
CD47-202ENST00000361309 DNPEPQ9ULA0 475 aa20.9■□□□□ 0.94
CD47-202ENST00000361309 A6NCN8 305 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 MFSD11O43934 449 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 DLGAP3O95886 979 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 PRLP01236 227 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 F3P13726 295 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 TCN2P20062 427 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 IL4RP24394 825 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 GARSP41250 739 aaKnown RBP20.89■□□□□ 0.93
CD47-202ENST00000361309 EPHA4P54764 986 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 MC1RQ01726 317 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 SLC25A11Q02978 314 aaKnown RBP20.89■□□□□ 0.93
CD47-202ENST00000361309 KRT81Q14533 505 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 ALG1LQ6GMV1 187 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 CLEC17AQ6ZS10 378 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 LYSMD3Q7Z3D4 306 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 BTBD6Q96KE9 485 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.89■□□□□ 0.93
CD47-202ENST00000361309 TTLL3Q9Y4R7 772 aa20.89■□□□□ 0.93
CD47-202ENST00000361309 MRPS18BQ9Y676 258 aaKnown RBP20.89■□□□□ 0.93
CD47-202ENST00000361309 FADS2P1A8MWK0 482 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 CD48P09326 243 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 SLC2A4P14672 509 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 STAT5AP42229 794 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 GALNT2Q10471 571 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 LACTB2Q53H82 288 aaPredicted RBP20.88■□□□□ 0.93
CD47-202ENST00000361309 HENMT1Q5T8I9 393 aaKnown RBP20.88■□□□□ 0.93
CD47-202ENST00000361309 RAVER1Q8IY67 606 aaKnown RBP20.88■□□□□ 0.93
CD47-202ENST00000361309 LPCAT1Q8NF37 534 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 MAML1Q92585 1016 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 RNF31Q96EP0 1072 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 RMI1Q9H9A7 625 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 PCDH9Q9HC56 1237 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 RBM22Q9NW64 420 aaKnown RBP eCLIP20.88■□□□□ 0.93
CD47-202ENST00000361309 CPNE7Q9UBL6 633 aa20.88■□□□□ 0.93
CD47-202ENST00000361309 SPTAN1Q13813 2472 aaKnown RBP20.88■□□□□ 0.93
CD47-202ENST00000361309 TEX15Q9BXT5 2789 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 SPENQ96T58 3664 aaKnown RBP20.87■□□□□ 0.93
CD47-202ENST00000361309 KIR2DS5A0A0G2JLQ3 304 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 A0A0G2JNG1 304 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 C1orf232A0A0U1RR37 186 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 CLEC18AA5D8T8 446 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 KIR2DS3K7RE56 304 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 MATN3O15232 486 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 CES1P23141 567 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 F8A1P23610 371 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 NOP2P46087 812 aaKnown RBP20.87■□□□□ 0.93
CD47-202ENST00000361309 SPINT3P49223 89 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 ZNF165P49910 485 aa20.87■□□□□ 0.93
CD47-202ENST00000361309 SEPT6Q14141 434 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms