RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 GNALP38405 381 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 CRYBB1P53674 252 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 PPP3R1P63098 170 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 CHST15Q7LFX5 561 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 FCRL2Q96LA5 508 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 RTKNQ9BST9 563 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 ARHGAP23Q9P227 1491 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 FFAR3O14843 346 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 GPR42O15529 346 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 ENTPD5O75356 428 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 CTSKP43235 329 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 FOXR2Q6PJQ5 311 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 MTMR8Q96EF0 704 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 THUMPD1Q9NXG2 353 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 TRPM6Q9BX84 2022 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 GLYATL1P3A0A0U1RQE8 302 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 DDTLA6NHG4 134 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 KERAO60938 352 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 TULP3O75386 442 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 SPAM1P38567 509 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PRICKLE1Q96MT3 831 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 GLIS2Q9BZE0 524 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 UNC5CO95185 931 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PSMA1P25786 263 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 MC4RP32245 332 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PLD4Q96BZ4 506 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 CDH19Q9H159 772 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 DUSP10Q9Y6W6 482 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 VWDEQ8N2E2 1590 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PAPSS2O95340 614 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 COX4I1P13073 169 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 CCNFP41002 786 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 ZNF697Q5TEC3 545 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 LCN1P1Q5VSP4 162 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 QSOX2Q6ZRP7 698 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 IRGQQ8WZA9 623 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 HIST1H2AAQ96QV6 131 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PPRC1Q5VV67 1664 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 TRIM38O00635 465 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 S100A1P23297 94 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PTDSS1P48651 473 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 EIF5AP63241 154 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 SUZ12Q15022 739 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 POM121L1PQ3SYA9 428 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 ZNF311Q5JNZ3 666 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 HPS6Q86YV9 775 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 LRRC52Q8N7C0 313 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 SLC22A18Q96BI1 424 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 IFT46Q9NQC8 304 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 CCDC59Q9P031 241 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 NUAK1O60285 661 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PGM3O95394 542 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 TMEM164Q5U3C3 297 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 RANBP3LQ86VV4 465 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 TTC29Q8NA56 475 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 CHID1Q9BWS9 393 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 DEC1Q9P2X7 70 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 GRSF1Q12849 480 aaKnown RBP eCLIP9.64□□□□□ -0.87
CUX1-203ENST00000360264 POC5Q8NA72 575 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 AENQ8WTP8 325 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 RAD51AP1Q96B01 352 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 HHATLQ9HCP6 504 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 RPP40O75818 363 aaKnown RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 GLRA2P23416 452 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 TMEM161BQ8NDZ6 487 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 AHCYL1O43865 530 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 CXCL14O95715 111 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 MTX3Q5HYI7 312 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 STYXQ8WUJ0 223 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 RHOBTB2Q9BYZ6 727 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PLGRKTQ9HBL7 147 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 C15orf41Q9Y2V0 281 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 SLC35G6P0C7Q6 338 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 C5orf22Q49AR2 442 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PTCHD4Q6ZW05 846 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 SVOPLQ8N434 492 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 NATD1Q8N6N6 113 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 FRMD6Q96NE9 622 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 EPB41L1Q9H4G0 881 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 FBXO6Q9NRD1 293 aaPredicted RBP9.64□□□□□ -0.87
CUX1-203ENST00000360264 GLS2Q9UI32 602 aa9.64□□□□□ -0.87
CUX1-203ENST00000360264 PPLO60437 1756 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 TCEA3O75764 348 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 ASLP04424 464 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PIK3R6Q5UE93 754 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 SPESP1Q6UW49 350 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 SPPL2BQ8TCT7 592 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 HM13Q8TCT9 377 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 FAXDC2Q96IV6 333 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 PDCD5O14737 125 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 RASGRP1O95267 797 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 SMAD3P84022 425 aaKnown RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 SF1Q15637 639 aaKnown RBP9.63□□□□□ -0.87
CUX1-203ENST00000360264 FAM35AQ86V20 835 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 C10orf107Q8IVU9 208 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 SNX33Q8WV41 574 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 NUDT4Q9NZJ9 180 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 XPR1Q9UBH6 696 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 TECPR2O15040 1411 aa9.63□□□□□ -0.87
CUX1-203ENST00000360264 SMIM35A0A1B0GVV1 85 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms