RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 HOXD12P35452 270 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 CPA2P48052 419 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ARFIP2P53365 341 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 NAGLUP54802 743 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SLC12A2P55011 1212 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 CTAG1AP78358 180 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TIAL1Q01085 375 aaKnown RBP eCLIP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 MPPE1Q53F39 396 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ZRANB3Q5FWF4 1079 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 PRSS36Q5K4E3 855 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ALG1LQ6GMV1 187 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 FAM151BQ6UXP7 276 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 KYAT3Q6YP21 454 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TAS2R42Q7RTR8 314 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 MAVSQ7Z434 540 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TBC1D1Q86TI0 1168 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TMEM151AQ8N4L1 468 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ZNF781Q8N8C0 355 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 DCAF4L2Q8NA75 395 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 OR4L1Q8NH43 312 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SMG7Q92540 1137 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 PHF21BQ96EK2 531 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 GPR78Q96P69 363 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SORT1Q99523 831 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SLC30A3Q99726 388 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 FAM167BQ9BTA0 163 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 C2orf49Q9BVC5 232 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 OSBPL1AQ9BXW6 950 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TRIM55Q9BYV6 548 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ZDHHC6Q9H6R6 413 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ALG9Q9H6U8 611 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 MRM3Q9HC36 420 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SLC40A1Q9NP59 571 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SARS2Q9NP81 518 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 CATSPERZQ9NTU4 200 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TMCC3Q9ULS5 477 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 MAFFQ9ULX9 164 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ARHGAP26Q9UNA1 814 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ACOT9Q9Y305 439 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 PCDHGA10Q9Y5H3 936 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 GOLGA8QA0A0J9YX86 632 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 GOLGA8OA6NCC3 632 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 A8MUI8 341 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TTC34A8MYJ7 566 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 GOLGA8NF8WBI6 632 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 AP3B1O00203 1094 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 DLX3O60479 287 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 PFDN1O60925 122 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SNNO75324 88 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 JUNP05412 331 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 UGT2B4P06133 528 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SRCP12931 536 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 HNRNPLP14866 589 aaKnown RBP eCLIP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 UGT1A6P19224 532 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 UGT1A1P22309 533 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 UGT1A4P22310 534 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 MC4RP32245 332 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 UGT1A3P35503 534 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 UGT1A5P35504 534 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 METAP1P53582 386 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ALDH18A1P54886 795 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 NCALDP61601 193 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ZBTB16Q05516 673 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SULT2A1Q06520 285 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 COX10Q12887 443 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SLC12A1Q13621 1099 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TUBA3CQ13748 450 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 UBAP2LQ14157 1087 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 FRG1Q14331 258 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 GEN1Q17RS7 908 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 MUM1Q2TAK8 710 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SMUG1Q53HV7 270 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 CMPK2Q5EBM0 449 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 RARS2Q5T160 578 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ARMC12Q5T9G4 340 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 LRRC8EQ6NSJ5 796 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 C11orf74Q86VG3 221 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 FAM217AQ8IXS0 508 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TXNDC5Q8NBS9 432 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 FIBINQ8TAL6 211 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 IRF7Q92985 503 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 VMP1Q96GC9 406 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 MYO19Q96H55 970 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 LRRC37BQ96QE4 947 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 GATA5Q9BWX5 397 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 GPR63Q9BZJ6 419 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 CIPCQ9C0C6 399 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 SLC7A5P2Q9GIP4 190 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 NMUR2Q9GZQ4 415 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 MFSD1Q9H3U5 465 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 EBF3Q9H4W6 596 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 GPAMQ9HCL2 828 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 ZNF304Q9HCX3 659 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 NOP53Q9NZM5 478 aaKnown RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 HECAQ9UBI9 543 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-202ENST00000359366 CD84Q9UIB8 345 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 IKZF3Q9UKT9 509 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 USH1CQ9Y6N9 552 aa5.07□□□□□ -1.6
ATXN3-202ENST00000359366 TCF20Q9UGU0 1960 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 DOCK8Q8NF50 2099 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms