RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 MUTYHQ9UIF7 546 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CRYL1Q9Y2S2 319 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 TTC28Q96AY4 2481 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 TBC1D3BA6NDS4 549 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 G3V2L1 256 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 CCL22O00626 93 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 PRMT5O14744 637 aaPredicted RBP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 TRIM24O15164 1050 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 LEFTY1O75610 366 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 APODP05090 189 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 RALBP11234 206 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 HNRNPLP14866 589 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 BPIP17213 487 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 GDI1P31150 447 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 OPRD1P41143 372 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 TNFRSF4P43489 277 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 SLC6A11P48066 632 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 HK2P52789 917 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 DCDC1P59894 354 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 ATP6V0D1P61421 351 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 BST1Q10588 318 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 PDAP1Q13442 181 aaKnown RBP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 NFATC2Q13469 925 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 SEMA3AQ14563 771 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 ELAVL3Q14576 367 aaKnown RBP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 FNDC3BQ53EP0 1204 aaKnown RBP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 RBM20Q5T481 1227 aaKnown RBP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 LIPMQ5VYY2 423 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 ERAP2Q6P179 960 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 ZNF549Q6P9A3 640 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 FAM47EQ6ZV65 393 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 TAS2R42Q7RTR8 314 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 OTOAQ7RTW8 1153 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 BMP8AQ7Z5Y6 402 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 ZSWIM9Q86XI8 627 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 SLC22A9Q8IVM8 553 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 FSTL5Q8N475 847 aaPredicted RBP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 OR6Y1Q8NGX8 325 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 RHEBL1Q8TAI7 183 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 KCNV2Q8TDN2 545 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 PPP4R1Q8TF05 950 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 HEXDCQ8WVB3 486 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 KCTD4Q8WVF5 259 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 DNASE1L2Q92874 299 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 PBXIP1Q96AQ6 731 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 EID2BQ96D98 161 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 ZFYVE19Q96K21 471 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 SCYL1Q96KG9 808 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 GPR78Q96P69 363 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 NDNQ99608 321 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 OLFM1Q99784 485 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 PLA2G2FQ9BZM2 168 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 TMEM245Q9H330 911 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 ASB8Q9H765 288 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 BPIFA1Q9NP55 256 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 OXSMQ9NWU1 459 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 KLHL42Q9P2K6 505 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 THAP10Q9P2Z0 257 aaPredicted RBP13.42□□□□□ -0.26
CCDC197-201ENST00000359253 TMCO1Q9UM00 188 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 USH1CQ9Y6N9 552 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 MYOFQ9NZM1 2061 aa13.42□□□□□ -0.26
CCDC197-201ENST00000359253 UBA6A0AVT1 1052 aaPredicted RBP13.41□□□□□ -0.26
CCDC197-201ENST00000359253 OTOL1A6NHN0 477 aaPredicted RBP13.41□□□□□ -0.26
CCDC197-201ENST00000359253 NPIPB15A6NHN6 443 aaPredicted RBP13.41□□□□□ -0.26
CCDC197-201ENST00000359253 TARM1B6A8C7 271 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 PRRT4C9JH25 899 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 H0Y858 1186 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 RHOBTB1O94844 696 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 KAT7O95251 611 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 PRAMEF1O95521 474 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 SLC4A1P02730 911 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 CCDC166P0CW27 439 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 FGF3P11487 239 aaPredicted RBP13.41□□□□□ -0.26
CCDC197-201ENST00000359253 ATP5F1P24539 256 aaPredicted RBP13.41□□□□□ -0.26
CCDC197-201ENST00000359253 ITGB7P26010 798 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 SPINT3P49223 89 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 DNAJB13P59910 316 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 IRF9Q00978 393 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 OCRLQ01968 901 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 PTSQ03393 145 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 CCDC15Q0P6D6 951 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 ELP6Q0PNE2 266 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 LRRC66Q68CR7 880 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 PSAPL1Q6NUJ1 521 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 TRIM67Q6ZTA4 783 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 DPPA4Q7L190 304 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 LDB1Q86U70 411 aaPredicted RBP13.41□□□□□ -0.26
CCDC197-201ENST00000359253 NRSN1Q8IZ57 195 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 CSGALNACT1Q8TDX6 532 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 NXNL1Q96CM4 212 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 MSANTD3Q96H12 275 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 SHDQ96IW2 340 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 CLPBQ9H078 707 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 P2RY12Q9H244 342 aa13.41□□□□□ -0.26
CCDC197-201ENST00000359253 TFB2MQ9H5Q4 396 aaKnown RBP13.41□□□□□ -0.26
CCDC197-201ENST00000359253 STN1Q9H668 368 aaKnown RBP13.41□□□□□ -0.26
CCDC197-201ENST00000359253 SLCO1B3Q9NPD5 702 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms