RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MYBL2P10244 700 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 NR2F6P10588 404 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 ALAS2P22557 587 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 CEBPGP53567 150 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 C9orf57Q5W0N0 161 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 SLC4A11Q8NBS3 891 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 ADAMTS15Q8TE58 950 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 P2RY11Q96G91 374 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 TSSK3Q96PN8 268 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 COMMD3-BMI1R4GMX3 469 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 RPP40O75818 363 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 NT5EP21589 574 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 PTGES3Q15185 160 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 SETD6Q8TBK2 473 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 UBIAD1Q9Y5Z9 338 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 XKRYO14609 159 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 LCA5LO95447 670 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 IFNA6P05013 189 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 CBX5P45973 191 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 ZNF398Q8TD17 642 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 FEM1CQ96JP0 617 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 CCNB1IP1Q9NPC3 277 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 ARL8BQ9NVJ2 186 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 PLK2Q9NYY3 685 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 FAM86C2PA6NEL3 165 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 FAUP35544 74 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 MNDAP41218 407 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 CCSAPQ6IQ19 270 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 CRELD2Q6UXH1 353 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 JOSD2Q8TAC2 188 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 HTRA1Q92743 480 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 CLP1Q92989 425 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 WDR55Q9H6Y2 383 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 ASGR1P07306 291 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 CES1P23141 567 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 PPIBP23284 216 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 SLC9A6Q92581 669 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 KCTD15Q96SI1 283 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 TCF25Q9BQ70 676 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 DMTF1Q9Y222 760 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 CARNS1A5YM72 827 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 IQCF5A8MTL0 148 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 BBIP1A8MTZ0 92 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 RGS20O76081 388 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 ACTR3P61158 418 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 ROR2Q01974 943 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 MYBPC3Q14896 1274 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 GPR158Q5T848 1215 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 RNASEH2BQ5TBB1 312 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 PLPPR4Q7Z2D5 763 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 VSIG10LQ86VR7 867 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 SEC14L3Q9UDX4 400 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 PRPF19Q9UMS4 504 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 PSMD9O00233 223 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 ZNF432O94892 652 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 FABP3P05413 133 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 WASP42768 502 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 SNAPC1Q16533 368 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 TOP6BLQ8N6T0 577 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 UBR7Q8N806 425 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 APOLD1Q96LR9 279 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 AIF1LQ9BQI0 150 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 ATG10Q9H0Y0 220 aa18.3■□□□□ 0.52
SHANK1-202ENST00000359082 NXF3Q9H4D5 531 aaKnown RBP18.3■□□□□ 0.52
SHANK1-202ENST00000359082 A0A0X1KG70 313 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 FKBP1AP62942 108 aaKnown RBP18.29■□□□□ 0.52
SHANK1-202ENST00000359082 TMPRSS11AQ6ZMR5 421 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 RTL4Q6ZR62 310 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 PIK3C3Q8NEB9 887 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 OR2L5Q8NG80 312 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 LMLNQ96KR4 655 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 ART5Q96L15 291 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 CNPPD1Q9BV87 410 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.52
SHANK1-202ENST00000359082 ACSS3Q9H6R3 686 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 A0A075B6Q4 140 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 DPYSQ14117 519 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 GCNT6Q5T4J0 391 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 FATE1Q969F0 183 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 JSRP1Q96MG2 331 aaPredicted RBP18.29■□□□□ 0.52
SHANK1-202ENST00000359082 MEIS2O14770 477 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 MDM4O15151 490 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 EIF1ADQ8N9N8 165 aaKnown RBP18.29■□□□□ 0.52
SHANK1-202ENST00000359082 SLC43A3Q8NBI5 491 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 B3GNT5Q9BYG0 378 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 LRTM1Q9HBL6 345 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 PCDH18Q9HCL0 1135 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 GPN1Q9HCN4 374 aaPredicted RBP18.29■□□□□ 0.52
SHANK1-202ENST00000359082 PTCH2Q9Y6C5 1203 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 EME2A4GXA9 379 aaPredicted RBP18.29■□□□□ 0.52
SHANK1-202ENST00000359082 ATG13O75143 517 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 RASGRP1O95267 797 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 CBX3Q13185 183 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 ZBTB6Q15916 424 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 SLC5A9Q2M3M2 681 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 PPP1R15BQ5SWA1 713 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 SH3RF1Q7Z6J0 888 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 IRF6O14896 467 aa18.29■□□□□ 0.52
SHANK1-202ENST00000359082 DCLK1O15075 740 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms