RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 PRELPP51888 382 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 CUL2Q13617 745 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 EFR3AQ14156 821 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 MFSD10Q14728 455 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 MFSD13AQ14CX5 517 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 TMEM65Q6PI78 240 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 C16orf62Q7Z3J2 963 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 STRA8Q7Z7C7 330 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 ZBTB33Q86T24 672 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 PLCZ1Q86YW0 608 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 TRIM48Q8IWZ4 208 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 KIAA0319LQ8IZA0 1049 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 ST8SIA2Q92186 375 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 C8orf37Q96NL8 207 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 LPIN3Q9BQK8 851 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 CEP41Q9BYV8 373 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 B3GNT2Q9NY97 397 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 DIMT1Q9UNQ2 313 aaKnown RBP11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 MINPP1Q9UNW1 487 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 MRPS7Q9Y2R9 242 aaKnown RBP11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 CIB4A0PJX0 185 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 TTC24A2A3L6 582 aaPredicted RBP11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 NOBOXO60393 691 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 TNFRSF21O75509 655 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 PAHP00439 452 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 SNHG28P0DPA3 235 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 TCF3P15923 654 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 ITGALP20701 1170 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 DNAJB1P25685 340 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 CYP24A1Q07973 514 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 TRIP4Q15650 581 aaPredicted RBP11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 TRIM60Q495X7 471 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 PYCR3Q53H96 274 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 BEND5Q7L4P6 421 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 NIPA2Q8N8Q9 360 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 KDM1BQ8NB78 822 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 TMBIM1Q969X1 311 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 APOL4Q9BPW4 351 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 FEM1AQ9BSK4 669 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 SMURF2Q9HAU4 748 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 FAM49BQ9NUQ9 324 aa11.36□□□□□ -0.59
SEPSECS-201ENST00000358971 PNMA8CA0A1B0GUJ8 204 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 DDX39AO00148 427 aaKnown RBP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PPEF1O14829 653 aaPredicted RBP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 NDUFA2O43678 99 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PLA2G6O60733 806 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 DNTTP04053 509 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 ALPLP05186 524 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 CCNYL3P0C7X3 344 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 ACO1P21399 889 aaKnown RBP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 MGAT1P26572 445 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 MIPP30301 263 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 BCAR1P56945 870 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 IL5RAQ01344 420 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 GPATCH4Q5T3I0 446 aaKnown RBP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 FSTL4Q6MZW2 842 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 RBM23Q86U06 439 aaKnown RBP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PELI3Q8N2H9 469 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 CRYGNQ8WXF5 182 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 ASIC4Q96FT7 647 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 FAM213AQ9BRX8 229 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 TRAF4Q9BUZ4 470 aaPredicted RBP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 MMP28Q9H239 520 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PIF1Q9H611 641 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PRDM8Q9NQV8 689 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 IL20Q9NYY1 176 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 TOGARAM1Q9Y4F4 1720 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 A0A1W2PRG6 482 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 TCP10L2B9ZVM9 353 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 C9JVG2 144 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 DFFAO00273 331 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 ATG13O75143 517 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 HNRNPLP14866 589 aaKnown RBP eCLIP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 SREBF1P36956 1147 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 MAGEA3P43357 314 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 GTF2A2P52657 109 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 NKX3-2P78367 333 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PRKCDQ05655 676 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 TAZQ16635 292 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 SYT16Q17RD7 645 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 TXNRD3Q86VQ6 643 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 TMEM199Q8N511 208 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PLD5Q8N7P1 536 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 ZBTB44Q8NCP5 570 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 OR4M2Q8NGB6 313 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 CNIH3Q8TBE1 160 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 SPPL2BQ8TCT7 592 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 ROPN1LQ96C74 230 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 MKLN1Q9UL63 735 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 BTN3A3O00478 584 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 ANGPT2O15123 496 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 CYP7B1O75881 506 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PIGAP37287 484 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 HNF4AP41235 474 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 PGGT1BP53609 377 aa11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 POLR2GP62487 172 aaKnown RBP eCLIP11.35□□□□□ -0.59
SEPSECS-201ENST00000358971 CES5AQ6NT32 575 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms