RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 GALNT1Q10472 559 aaPredicted RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 SF3A3Q12874 501 aaKnown RBP eCLIP13.22□□□□□ -0.29
NFIX-201ENST00000358552 RUNX3Q13761 415 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 GEN1Q17RS7 908 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 ZNF805Q5CZA5 627 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 PIWIL4Q7Z3Z4 852 aaKnown RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 DSG4Q86SJ6 1040 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 NAT16Q8N8M0 369 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 ENDOVQ8N8Q3 282 aaKnown RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 TMIEQ8NEW7 156 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 GRIN3AQ8TCU5 1115 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 NSL1Q96IY1 281 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 GPR78Q96P69 363 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 LRRC3BQ96PB8 259 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 WWP1Q9H0M0 922 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 C12orf65Q9H3J6 166 aaKnown RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 TFB2MQ9H5Q4 396 aaKnown RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 DCLRE1BQ9H816 532 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 BRD9Q9H8M2 597 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 MRGBPQ9NV56 204 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 NFKBIL1Q9UBC1 381 aaPredicted RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 CRYL1Q9Y2S2 319 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 C5orf42Q9H799 3197 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 TRBV5-4A0A0C4DH59 114 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 AGAP14A8MT82 685 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 TARM1B6A8C7 271 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 PSMD11O00231 422 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 LINC01565O15544 149 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 BUD23O43709 281 aaKnown RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 NPHS1O60500 1241 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 RHOBTB1O94844 696 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 CCDC166P0CW27 439 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 TPBGLP0DKB5 382 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 KCNA4P22459 653 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 DCDC1P59894 354 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 NFATC2Q13469 925 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 ADGRE1Q14246 886 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 SMAD1Q15797 465 aaKnown RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 ERAP2Q6P179 960 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 TAS2R42Q7RTR8 314 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 CLNKQ7Z7G1 428 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 KIF2BQ8N4N8 673 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 AFAP1L2Q8N4X5 818 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 OR6K2Q8NGY2 324 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 STAG3L4Q8TBR4 150 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 KCTD4Q8WVF5 259 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 NXNL1Q96CM4 212 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 CNDP1Q96KN2 507 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 MECRQ9BV79 373 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 DERL2Q9GZP9 239 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 ILKAPQ9H0C8 392 aaPredicted RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 EBF3Q9H4W6 596 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 ASB8Q9H765 288 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 EML4Q9HC35 981 aaKnown RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 NPHS2Q9NP85 383 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.22□□□□□ -0.29
NFIX-201ENST00000358552 KCTD5Q9NXV2 234 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 STOML1Q9UBI4 398 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 GNPTGQ9UJJ9 305 aa13.22□□□□□ -0.29
NFIX-201ENST00000358552 APOBEC2Q9Y235 224 aaKnown RBP13.22□□□□□ -0.29
NFIX-201ENST00000358552 UBA6A0AVT1 1052 aaPredicted RBP13.21□□□□□ -0.3
NFIX-201ENST00000358552 OR51F1A6NGY5 319 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 H0Y858 1186 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 QSOX1O00391 747 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 PRAMEF1O95521 474 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 UGT2B4P06133 528 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 LAMP2P13473 410 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 ZNF37AP17032 561 aaPredicted RBP13.21□□□□□ -0.3
NFIX-201ENST00000358552 CTPS1P17812 591 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 IRF9Q00978 393 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 PRKAA1Q13131 559 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 CSHL1Q14406 222 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 ELAVL3Q14576 367 aaKnown RBP13.21□□□□□ -0.3
NFIX-201ENST00000358552 PTPRNQ16849 979 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 CTC1Q2NKJ3 1217 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 RBM20Q5T481 1227 aaKnown RBP13.21□□□□□ -0.3
NFIX-201ENST00000358552 TMEM215Q68D42 235 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 CRTC1Q6UUV9 634 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 Q6ZVU0 165 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.3
NFIX-201ENST00000358552 LONP2Q86WA8 852 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 TMEM151AQ8N4L1 468 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 ACVR1CQ8NER5 493 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 PBXIP1Q96AQ6 731 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 PDLIM5Q96HC4 596 aaKnown RBP13.21□□□□□ -0.3
NFIX-201ENST00000358552 NDNQ99608 321 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 OLFM1Q99784 485 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 BTBD10Q9BSF8 475 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 TBC1D10AQ9BXI6 508 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 DRC3Q9H069 523 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 CLPBQ9H078 707 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 IGSF5Q9NSI5 407 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 XPR1Q9UBH6 696 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 VTI1BQ9UEU0 232 aa13.21□□□□□ -0.3
NFIX-201ENST00000358552 TRMT6Q9UJA5 497 aaKnown RBP13.21□□□□□ -0.3
NFIX-201ENST00000358552 HAO1Q9UJM8 370 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms