RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SLC39A8Q9C0K1 460 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 EXO5Q9H790 373 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 OAZ3Q9UMX2 235 aa8.74□□□□□ -1.01
COL6A6-201ENST00000358511 NTSP30990 170 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CD86P42081 329 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 DALRD3Q5D0E6 543 aaKnown RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 KCNS3Q9BQ31 491 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ASB7Q9H672 318 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 GDAP2Q9NXN4 497 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 TRIM64A6NGJ6 449 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 TEX46H3BTG2 121 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CDH1P12830 882 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 FSTL1Q12841 308 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 FAM183BPQ6ZVS7 135 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 SLCO2A1Q92959 643 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CPB2Q96IY4 423 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 QRFPRQ96P65 431 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF717Q9BY31 904 aaPredicted RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ZCCHC2Q9C0B9 1178 aaKnown RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ATXN3LQ9H3M9 355 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ZFC3H1O60293 1989 aaKnown RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 B3GAT3O94766 335 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CYP2C18P33260 490 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 KCTD19Q17RG1 926 aaPredicted RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CYP20A1Q6UW02 462 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ANKS1BQ7Z6G8 1248 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 PXMP2Q9NR77 195 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ZDHHC18Q9NUE0 388 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 UPB1Q9UBR1 384 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 OAS3Q9Y6K5 1087 aaKnown RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 EI24O14681 340 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 EPORP19235 508 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 SPATS1Q496A3 300 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 TPRG1LQ5T0D9 272 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ANXA8L1Q5VT79 327 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 DAW1Q8N136 415 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 SPATA6LQ8N4H0 392 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF285Q96NJ3 590 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 GTPBP2Q9BX10 602 aaKnown RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 J3QRK9 145 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 FGRP09769 529 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CDKN2BP42772 138 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 HADHBP55084 474 aaKnown RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 MVKQ03426 396 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 RBBP4Q09028 425 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 FBXL8Q96CD0 374 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 MTA2O94776 668 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 BMP7P18075 431 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 STOMP27105 288 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 TAS2R41P59536 307 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ATP13A4Q4VNC1 1196 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ULK3Q6PHR2 472 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CYP2W1Q8TAV3 490 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ADAM32Q8TC27 787 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 TWIST2Q8WVJ9 160 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 EDEM1Q92611 657 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 XKR8Q9H6D3 395 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 KCNQ5Q9NR82 932 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 SLIT3O75094 1523 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 PDPK1O15530 556 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 C8BP07358 591 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 RHOCP08134 193 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 ANXA5P08758 320 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CSH1P0DML2 217 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 CSH2P0DML3 217 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 TSPAN8P19075 237 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 SIM2Q14190 667 aaPredicted RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 LAPTM4BQ86VI4 370 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 SLC2A14Q8TDB8 520 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 WNT8BQ93098 351 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 SNRNP25Q9BV90 132 aaKnown RBP8.73□□□□□ -1.01
COL6A6-201ENST00000358511 UCKL1Q9NWZ5 548 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 VPS51Q9UID3 782 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 PEAK1Q9H792 1746 aa8.73□□□□□ -1.01
COL6A6-201ENST00000358511 PGLSO95336 258 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 PCSK2P16519 638 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 GPD2P43304 727 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 THOP1P52888 689 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CDK18Q07002 472 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 LSM12Q3MHD2 195 aaKnown RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 OOSP2Q86WS3 158 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 GLT1D1Q96MS3 346 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SALL4Q9UJQ4 1053 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 PHF24Q9UPV7 400 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 TCRBV7S2A1N4TA0A589 114 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 AQP12BA6NM10 295 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SCELO95171 688 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 MT-ND1P03886 318 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 GTF2E2P29084 291 aaKnown RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ENTPD1P49961 510 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 ARHGDIBP52566 201 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 SNAPC1Q16533 368 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 WSCD2Q2TBF2 565 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 RALGPS2Q86X27 583 aaPredicted RBP8.72□□□□□ -1.01
COL6A6-201ENST00000358511 AQP12AQ8IXF9 295 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 CPT1BQ92523 772 aa8.72□□□□□ -1.01
COL6A6-201ENST00000358511 HAS1Q92839 578 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms