RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 HLA-BQ31612 363 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 KCTD11Q693B1 232 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 PDPK2PQ6A1A2 396 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 ADAMTSL4Q6UY14 1074 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 Q6ZSR6 202 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 SLC22A18ASQ8N1D0 253 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 TTC30BQ8N4P2 665 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 COG1Q8WTW3 980 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 WDR92Q96MX6 357 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 ELF4Q99607 663 aaPredicted RBP3.96□□□□□ -1.78
CNOT4-202ENST00000356162 APOOQ9BUR5 198 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 PHACTR1Q9C0D0 580 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 ABCG8Q9H221 673 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 GAREM1Q9H706 876 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 WDR26Q9H7D7 661 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 ZFYVE1Q9HBF4 777 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 ARNT2Q9HBZ2 717 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 MBNL1Q9NR56 388 aaKnown RBP3.96□□□□□ -1.78
CNOT4-202ENST00000356162 PHPT1Q9NRX4 125 aaPredicted RBP3.96□□□□□ -1.78
CNOT4-202ENST00000356162 UBP1Q9NZI7 540 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 RNF14Q9UBS8 474 aa3.96□□□□□ -1.78
CNOT4-202ENST00000356162 FNDC3AQ9Y2H6 1198 aaKnown RBP3.96□□□□□ -1.78
CNOT4-202ENST00000356162 PLXNB3Q9ULL4 1909 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SPTY2D1-AS1A0A0U1RR47 76 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 POM121BA6NF01 834 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 C4orf47A7E2U8 309 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PDE2AO00408 941 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TNFRSF10CO14798 259 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SUN1O94901 812 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CLDN7O95471 211 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 METTL18O95568 372 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 ITGB2P05107 769 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 MYCLP1P12525 358 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 NME1P15531 152 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TPSB2P20231 275 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CSRP1P21291 193 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 HTR1BP28222 390 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 COILP38432 576 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SPAM1P38567 509 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 ETV3P41162 512 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 ARRB1P49407 418 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 THOP1P52888 689 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 ETF1P62495 437 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PDE1BQ01064 536 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 FZD2Q14332 565 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SUZ12Q15022 739 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TAF1AQ15573 450 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TPSAB1Q15661 275 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 RSPO4Q2I0M5 234 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PLA2G4EQ3MJ16 856 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 HENMT1Q5T8I9 393 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 FAXCQ5TGI0 409 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 ARMC3Q5W041 872 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 RAET1GQ6H3X3 334 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PNCKQ6P2M8 343 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 RANBP10Q6VN20 620 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 KANSL1Q7Z3B3 1105 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 GLT6D1Q7Z4J2 308 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TMC3Q7Z5M5 1100 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PIP4P1Q86T03 277 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 LINC00523Q86TU6 105 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PHACTR4Q8IZ21 702 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SLC25A41Q8N5S1 370 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TRAM1L1Q8N609 369 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 DTX3LQ8TDB6 740 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 BTN2A2Q8WVV5 523 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 MAGOHBQ96A72 148 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 AP2M1Q96CW1 435 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 MS4A14Q96JA4 679 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PLEKHG4BQ96PX9 1271 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SMIM14Q96QK8 99 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TEX101Q9BY14 249 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 FRMD8Q9BZ67 464 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 GPR63Q9BZJ6 419 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 NEUROD4Q9HD90 331 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TM7SF3Q9NS93 570 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 RXFP3Q9NSD7 469 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 DLL3Q9NYJ7 618 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.95□□□□□ -1.788e-7■■■□□ 19.2
CNOT4-202ENST00000356162 KLQ9UEF7 1012 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SPO11Q9Y5K1 396 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SAR1BQ9Y6B6 198 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 A8MX80 341 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CCDC188H7C350 402 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 KIF2AO00139 706 aaPredicted RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 AP3B1O00203 1094 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PPFIA2O75334 1257 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 PIAS2O75928 621 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 RASGRP1O95267 797 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 GAS8O95995 478 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SOD1P00441 154 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 AGTP01019 485 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 SLC4A1P02730 911 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TUBB4AP04350 444 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 IVLP07476 585 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CD59P13987 128 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 COL8A1P27658 744 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 CASQ1P31415 396 aa3.95□□□□□ -1.78
CNOT4-202ENST00000356162 RPL22P35268 128 aaKnown RBP3.95□□□□□ -1.78
CNOT4-202ENST00000356162 TRIM23P36406 574 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms