RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 RPIAP49247 311 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF460Q14592 562 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 SLC1A5Q15758 541 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 KIAA0408Q6ZU52 694 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 TCAIMQ8N3R3 496 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 TRMOQ9BU70 441 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 KLHL3Q9UH77 587 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 NHSL1Q5SYE7 1610 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 MAGEA13PA6NCF6 341 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 H3BN98 237 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 J3KR12 359 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 PSME3P61289 254 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 MRPS35P82673 323 aaKnown RBP14.83□□□□□ -0.04
COL17A1-201ENST00000353479 PDGFRLQ15198 375 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 ARSIQ5FYB1 569 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 TMEM220Q6QAJ8 160 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 TAF8Q7Z7C8 310 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF490Q9ULM2 529 aaPredicted RBP14.83□□□□□ -0.04
COL17A1-201ENST00000353479 AP3M1Q9Y2T2 418 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 FFAR2O15552 330 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 STK16O75716 305 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 TMEM63AO94886 807 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 ENO2P09104 434 aaPredicted RBP14.83□□□□□ -0.04
COL17A1-201ENST00000353479 KPNB1Q14974 876 aaKnown RBP14.83□□□□□ -0.04
COL17A1-201ENST00000353479 CYP1B1Q16678 543 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF549Q6P9A3 640 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 GRHL1Q9NZI5 618 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 IGKV6D-21A0A0A0MT36 114 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 EDF1O60869 148 aaKnown RBP14.83□□□□□ -0.04
COL17A1-201ENST00000353479 CCNDBP1O95273 360 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 CHST15Q7LFX5 561 aaPredicted RBP14.83□□□□□ -0.04
COL17A1-201ENST00000353479 CMTM8Q8IZV2 173 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF366Q8N895 744 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 SLC35B2Q8TB61 432 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 PANX1Q96RD7 426 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 TRMT61BQ9BVS5 477 aaKnown RBP14.83□□□□□ -0.04
COL17A1-201ENST00000353479 DUSP12Q9UNI6 340 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 SQORQ9Y6N5 450 aa14.83□□□□□ -0.04
COL17A1-201ENST00000353479 SERPINA6P08185 405 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 SLC25A11Q02978 314 aaKnown RBP14.82□□□□□ -0.04
COL17A1-201ENST00000353479 SLC34A1Q06495 639 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 MFSD5Q6N075 450 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 CHSY3Q70JA7 882 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 GATAD2AQ86YP4 633 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 ZC3H3Q8IXZ2 948 aaKnown RBP14.82□□□□□ -0.04
COL17A1-201ENST00000353479 PYDC1Q8WXC3 89 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 WDR55Q9H6Y2 383 aaPredicted RBP14.82□□□□□ -0.04
COL17A1-201ENST00000353479 UMPSP11172 480 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 IDO1P14902 403 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 PIK3R1P27986 724 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 HSPA7P48741 367 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 HCAR3P49019 387 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 MLLT6P55198 1093 aaPredicted RBP14.82□□□□□ -0.04
COL17A1-201ENST00000353479 INTS11Q5TA45 600 aaKnown RBP14.82□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF276Q8N554 614 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 DCBLD1Q8N8Z6 715 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 BADQ92934 168 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 RAD9AQ99638 391 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 AIF1LQ9BQI0 150 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 XYLT2Q9H1B5 865 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF180Q9UJW8 692 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 GGA2Q9UJY4 613 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 DNAJC25-GNG10A0A024R161 153 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 SSR2P43308 183 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 RXRGP48443 463 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 TRMT10BQ6PF06 316 aaKnown RBP14.82□□□□□ -0.04
COL17A1-201ENST00000353479 VN1R5Q7Z5H4 357 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 CYP4Z2PQ8N1L4 340 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 CLHC1Q8NHS4 586 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 RCN3Q96D15 328 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 BORCS6Q96GS4 357 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 GPR62Q9BZJ7 368 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 ANAPC2Q9UJX6 822 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 OR10H1Q9Y4A9 318 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 SLC7A4O43246 635 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 ILF3Q12906 894 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL17A1-201ENST00000353479 GPAT3Q53EU6 434 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 ZFP1Q6P2D0 407 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 SLC39A5Q6ZMH5 540 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 OR13C4Q8NGS5 318 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 RP9Q8TA86 221 aaKnown RBP14.82□□□□□ -0.04
COL17A1-201ENST00000353479 OR52E6Q96RD3 313 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 RIBC2Q9H4K1 309 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 SUV39H2Q9H5I1 410 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 TIMM22Q9Y584 194 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 MYH3P11055 1940 aa14.82□□□□□ -0.04
COL17A1-201ENST00000353479 MAGEA11P43364 429 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 TOMM20Q15388 145 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 OASLQ15646 514 aaKnown RBP14.81□□□□□ -0.04
COL17A1-201ENST00000353479 CPNE9Q8IYJ1 553 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 KLHL23Q8NBE8 558 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF599Q96NL3 588 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 SPAG4Q9NPE6 437 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 BATF3Q9NR55 127 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 IL36AQ9UHA7 158 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 VPS4AQ9UN37 437 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 GRIA3P42263 894 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 SLC1A2P43004 574 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 CASP12Q6UXS9 341 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 R3HCC1LQ7Z5L2 792 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms