RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MRNIPQ6NTE8 343 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 RAB44Q7Z6P3 723 aaPredicted RBP18■□□□□ 0.47
PTP4A3-202ENST00000349124 CLVS1Q8IUQ0 354 aaPredicted RBP18■□□□□ 0.47
PTP4A3-202ENST00000349124 ZUFSPQ96AP4 578 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 CDK15Q96Q40 435 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 DCUN1D5Q9BTE7 237 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 GPR45Q9Y5Y3 372 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 EI24O14681 340 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 RPP40O75818 363 aaKnown RBP18■□□□□ 0.47
PTP4A3-202ENST00000349124 GSK3BP49841 420 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 SH3BGRP55822 239 aaPredicted RBP18■□□□□ 0.47
PTP4A3-202ENST00000349124 PLIN5Q00G26 463 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 NFYCQ13952 458 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 ADRM1Q16186 407 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 C10orf120Q5SQS8 335 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 FBXO39Q8N4B4 442 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 TMEM125Q96AQ2 219 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 SEPHS2Q99611 448 aa18■□□□□ 0.47
PTP4A3-202ENST00000349124 EVLQ9UI08 416 aaPredicted RBP18■□□□□ 0.47
PTP4A3-202ENST00000349124 COL4A4P53420 1690 aaPredicted RBP17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 NPEPPSL1A6NEC2 478 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 GLTPD2A6NH11 291 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 OR1I1O60431 355 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 CRCPO75575 148 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 IL10P22301 178 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 FASP25445 335 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 ZFP36L2P47974 494 aaKnown RBP17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 STC1P52823 247 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 DSC3Q14574 896 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 PYCR3Q53H96 274 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 GALNT7Q86SF2 657 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 SYVN1Q86TM6 617 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 CAMK1DQ8IU85 385 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 OR4K2Q8NGD2 314 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 OR2T11Q8NH01 316 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 GPR21Q99679 349 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 MRGBPQ9NV56 204 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 INTS7Q9NVH2 962 aaKnown RBP17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 SLC8A2Q9UPR5 921 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 OAS3Q9Y6K5 1087 aaKnown RBP17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 LAMA3Q16787 3333 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 GPR39O43194 453 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 AKR1A1P14550 325 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 PSMA4P25789 261 aaKnown RBP17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 CTGFP29279 349 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 IL12AP29459 219 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 KCNQ1P51787 676 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 ACVR1Q04771 509 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 PLCL1Q15111 1095 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 NADSYN1Q6IA69 706 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 TBPL2Q6SJ96 375 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 KIAA2013Q8IYS2 634 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 OR7D4Q8NG98 312 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 BRSK1Q8TDC3 778 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 MYRFLQ96LU7 910 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 POLR1EQ9GZS1 481 aaKnown RBP17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 RHBDL2Q9NX52 303 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 MARCH2Q9P0N8 246 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 ACTR3BQ9P1U1 418 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 Q9Y3F1 56 aa17.99■□□□□ 0.47
PTP4A3-202ENST00000349124 IGLV3-10A0A075B6K4 115 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 A0A0J9YVX5 310 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 BBIP1A8MTZ0 92 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 HSD17B1P14061 328 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 OR1G1P47890 313 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 CCT8P50990 548 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 LIPEQ05469 1076 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 TAF10Q12962 218 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 TRIM32Q13049 653 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 ZNF235Q14590 738 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 TAF1CQ15572 869 aaPredicted RBP17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 RALGPS2Q86X27 583 aaPredicted RBP17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 ERI1Q8IV48 349 aaKnown RBP17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 AQP12BA6NM10 295 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 TSPAN3O60637 253 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 PBX3P40426 434 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 SUOXP51687 545 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 IL10RBQ08334 325 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 LCP2Q13094 533 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 INPP5AQ14642 412 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 TIGD2Q4W5G0 525 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 AQP12AQ8IXF9 295 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 PIANPQ8IYJ0 282 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 DCP1BQ8IZD4 617 aaKnown RBP17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 TRPV3Q8NET8 790 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 MAGEE2Q8TD90 523 aaPredicted RBP17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 KIAA1191Q96A73 305 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 FUBP1Q96AE4 644 aaKnown RBP17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 HSPBAP1Q96EW2 488 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 ALG2Q9H553 416 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 TFB2MQ9H5Q4 396 aaKnown RBP17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 CCSER2Q9H7U1 834 aa17.98■□□□□ 0.47
PTP4A3-202ENST00000349124 MIA3Q5JRA6 1907 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 LAMA2P24043 3122 aaKnown RBP17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 BTN3A1O00481 513 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 DUSP11O75319 330 aaKnown RBP17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 CYBBP04839 570 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 CLCN2P51788 898 aa17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 C18orf21Q32NC0 220 aaPredicted RBP17.97■□□□□ 0.47
PTP4A3-202ENST00000349124 LCN8Q6JVE9 175 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms