RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 UBDO15205 165 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 LPOP22079 712 aaPredicted RBP13.83□□□□□ -0.19
TRIM4-201ENST00000349062 PRDX3P30048 256 aaKnown RBP13.83□□□□□ -0.19
TRIM4-201ENST00000349062 NTHL1P78549 312 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 TRMT5Q32P41 509 aaKnown RBP13.83□□□□□ -0.19
TRIM4-201ENST00000349062 PTRHD1Q6GMV3 140 aaKnown RBP13.83□□□□□ -0.19
TRIM4-201ENST00000349062 CXorf57Q6NSI4 855 aaKnown RBP13.83□□□□□ -0.19
TRIM4-201ENST00000349062 RAB44Q7Z6P3 723 aaPredicted RBP13.83□□□□□ -0.19
TRIM4-201ENST00000349062 DSELQ8IZU8 1212 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 EEF1AKMT1Q8WVE0 214 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 SORCS1Q8WY21 1168 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 LINGO1Q96FE5 620 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 ASIC4Q96FT7 647 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 ZDHHC4Q9NPG8 344 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 IL37Q9NZH6 218 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 ZMYM5Q9UJ78 669 aa13.83□□□□□ -0.19
TRIM4-201ENST00000349062 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.19
TRIM4-201ENST00000349062 NR5A2O00482 541 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 KDELR3O43731 214 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 CLDN7O95471 211 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 COL6A1P12109 1028 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 SYN1P17600 705 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 CPOXP36551 454 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 PIWIL4Q7Z3Z4 852 aaKnown RBP13.83□□□□□ -0.2
TRIM4-201ENST00000349062 FBXO39Q8N4B4 442 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 PTCD2Q8WV60 388 aaKnown RBP13.83□□□□□ -0.2
TRIM4-201ENST00000349062 C3orf30Q96M34 536 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 TMEM175Q9BSA9 504 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 PCDHAC1Q9H158 963 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 ABCB8Q9NUT2 735 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 TAS2R13Q9NYV9 303 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 RPL26L1Q9UNX3 145 aaKnown RBP13.83□□□□□ -0.2
TRIM4-201ENST00000349062 DOCK4Q8N1I0 1966 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 KRT87PA6NCN2 255 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 MROH6A6NGR9 719 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 CAPN8A6NHC0 703 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 H3BNC9 293 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 TGM5O43548 720 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 SNX2O60749 519 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 MTX2O75431 263 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 ZNF189O75820 626 aaPredicted RBP13.83□□□□□ -0.2
TRIM4-201ENST00000349062 PRLP01236 227 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 C8AP07357 584 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 ZDHHC11BP0C7U3 371 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 CD70P32970 193 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 FASTKQ14296 549 aaKnown RBP13.83□□□□□ -0.2
TRIM4-201ENST00000349062 LRRC26Q2I0M4 334 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 SLC5A9Q2M3M2 681 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 GAREM2Q75VX8 874 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 CNTN4Q8IWV2 1026 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 TEX26Q8N6G2 289 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 KYQ8NBH2 561 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 PDZD8Q8NEN9 1154 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 NUDT8Q8WV74 236 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 PPP1R2P1Q96PQ5 205 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 EGFL8Q99944 293 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 TDRD1Q9BXT4 1180 aaKnown RBP13.83□□□□□ -0.2
TRIM4-201ENST00000349062 ADGRE3Q9BY15 652 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 LATS2Q9NRM7 1088 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 HACD3Q9P035 362 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 POMPQ9Y244 141 aa13.83□□□□□ -0.2
TRIM4-201ENST00000349062 ATG2BQ96BY7 2078 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 GIPC1O14908 333 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 FGF18O76093 207 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 PPARGP37231 505 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 THOP1P52888 689 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 FAM45BPQ6NSW5 357 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 RFLNAQ6ZTI6 216 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 FRA10AC1Q70Z53 315 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 HERC6Q8IVU3 1022 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 FAM45AQ8TCE6 357 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 TCEAL4Q96EI5 215 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 CNBD2Q96M20 576 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 FAM192AQ9GZU8 254 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 ZDHHC6Q9H6R6 413 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 ASB8Q9H765 288 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 PDFQ9HBH1 243 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 LMCD1Q9NZU5 365 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 NEDD8-MDP1E9PL57 170 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 SDHDO14521 159 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 TPST1O60507 370 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 DNAJA2O60884 412 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 IL1BP01584 269 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 CLTBP09497 229 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 THRAP10827 490 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 XRCC1P18887 633 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 STC1P52823 247 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 ACTR3P61158 418 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 SH3BP2P78314 561 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 NRG1Q02297 640 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 FUT11Q495W5 492 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 TSPAN33Q86UF1 283 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 APLFQ8IW19 511 aaPredicted RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 CDYL2Q8N8U2 506 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 TOP1MTQ969P6 601 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 ISL2Q96A47 359 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 WDR41Q9HAD4 459 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 ARNT2Q9HBZ2 717 aa13.82□□□□□ -0.2
TRIM4-201ENST00000349062 LSM7Q9UK45 103 aaKnown RBP13.82□□□□□ -0.2
TRIM4-201ENST00000349062 SDK1Q7Z5N4 2213 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms