RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 STRADAQ7RTN6 431 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 SYTL1Q8IYJ3 562 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 PIK3C3Q8NEB9 887 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 FAM83FQ8NEG4 500 aaPredicted RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 MCFD2Q8NI22 146 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 CENPIQ92674 756 aaPredicted RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 PCYT2Q99447 389 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 C6orf62Q9GZU0 229 aaPredicted RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 DPEP3Q9H4B8 488 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 GSTO2Q9H4Y5 243 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 MID1IP1Q9NPA3 183 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 FBXO8Q9NRD0 319 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 MRPL42Q9Y6G3 142 aaKnown RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 A8MV72 311 aaPredicted RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 TTC34A8MYJ7 566 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 SLC1A7O00341 560 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 TUFMP49411 452 aaKnown RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 FOXA1P55317 472 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 KCNAB2Q13303 367 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 AGAP9Q5VTM2 703 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 SLC22A15Q8IZD6 547 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 GOLM1Q8NBJ4 401 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 RHOXF1Q8NHV9 184 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 BTN2A3PQ96KV6 586 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 AMBRA1Q9C0C7 1298 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 SMOC2Q9H3U7 446 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 MAGEE1Q9HCI5 957 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 INTS7Q9NVH2 962 aaKnown RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 SCN9AQ15858 1988 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 G3V2T6 193 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 M0QX08 132 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 ACKR2O00590 384 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 UPK1BO75841 260 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 GABARAPO95166 117 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 SIX3O95343 332 aaPredicted RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 EIF2DP41214 584 aaKnown RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 KCNK10P57789 538 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 IL5RAQ01344 420 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 CBX2Q14781 532 aaPredicted RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 TMEM132DQ14C87 1099 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 FBXO48Q5FWF7 155 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 KCTD11Q693B1 232 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 SPESP1Q6UW49 350 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 DCP1BQ8IZD4 617 aaKnown RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 MCOLN3Q8TDD5 553 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 NGLY1Q96IV0 654 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 DPP3Q9NY33 737 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 ERVK-18Q9QC07 812 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 KIAA1257Q9ULG3 409 aa15.28■□□□□ 0.04
LMNA-201ENST00000347559 OAS3Q9Y6K5 1087 aaKnown RBP15.28■□□□□ 0.04
LMNA-201ENST00000347559 KLRG2A4D1S0 409 aaPredicted RBP15.27■□□□□ 0.04
LMNA-201ENST00000347559 M0QYT0 321 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 HS6ST1O60243 411 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 MT-CYBP00156 380 aaPredicted RBP15.27■□□□□ 0.04
LMNA-201ENST00000347559 ALOX12P18054 663 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 ITIH1P19827 911 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 HRH2P25021 359 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 NOS2P35228 1153 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 SNX16P57768 344 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 SH3BP2P78314 561 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 INCA1Q0VD86 236 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 TARBP2Q15633 366 aaKnown RBP15.27■□□□□ 0.04
LMNA-201ENST00000347559 IER5Q5VY09 327 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 TXNDC11Q6PKC3 985 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 TWIST2Q8WVJ9 160 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 FAR1Q8WVX9 515 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 CCDC126Q96EE4 140 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 CELF6Q96J87 481 aaKnown RBP15.27■□□□□ 0.04
LMNA-201ENST00000347559 TEX37Q96LM6 180 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 DMRTB1Q96MA1 342 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 CLSTN3Q9BQT9 956 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 C11orf84Q9BUA3 381 aaPredicted RBP15.27■□□□□ 0.04
LMNA-201ENST00000347559 PRDM8Q9NQV8 689 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 ZNF639Q9UID6 485 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 FBXO5Q9UKT4 447 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 INVSQ9Y283 1065 aa15.27■□□□□ 0.04
LMNA-201ENST00000347559 A0A087X1B8 175 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 RGS13O14921 159 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 UMPSP11172 480 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 ITGB6P18564 788 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 FMO3P31513 532 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 ATICP31939 592 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 KCNC1P48547 511 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 NAPEPLDQ6IQ20 393 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 SCIMPQ6UWF3 145 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 FBXO30Q8TB52 745 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 ANKRD49Q8WVL7 239 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 AKT1S1Q96B36 256 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 GAD1Q99259 594 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 SP140LQ9H930 580 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 MOSPD1Q9UJG1 213 aa15.27■□□□□ 0.03
LMNA-201ENST00000347559 CAB39Q9Y376 341 aaPredicted RBP15.27■□□□□ 0.03
LMNA-201ENST00000347559 UPK1AO00322 258 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 LTA4HP09960 611 aaKnown RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 CLCN3P51790 818 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 PKDCCQ504Y2 493 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 CLYBLQ8N0X4 340 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 CELF2-AS1Q8N7Q2 184 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 ITFG1Q8TB96 612 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms