RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 MON1AQ86VX9 555 aa15.44■□□□□ 0.06
SRPK1-201ENST00000346162 AADATQ8N5Z0 425 aa15.44■□□□□ 0.06
SRPK1-201ENST00000346162 SLC35B2Q8TB61 432 aa15.44■□□□□ 0.06
SRPK1-201ENST00000346162 RDH11Q8TC12 318 aa15.44■□□□□ 0.06
SRPK1-201ENST00000346162 GMLQ99445 158 aa15.44■□□□□ 0.06
SRPK1-201ENST00000346162 GLOD4Q9HC38 313 aa15.44■□□□□ 0.06
SRPK1-201ENST00000346162 ZNF112Q9UJU3 913 aa15.44■□□□□ 0.06
SRPK1-201ENST00000346162 ATP6AP2A0A1C7CYW4 349 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 EFCAB14O75071 495 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 PAGE1O75459 146 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 ATP6AP2O75787 350 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 TOP3BO95985 862 aaKnown RBP15.43■□□□□ 0.06
SRPK1-201ENST00000346162 CCNCP24863 283 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 BCL2L1Q07817 233 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 BTG3Q14201 252 aaPredicted RBP15.43■□□□□ 0.06
SRPK1-201ENST00000346162 IL23RQ5VWK5 629 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 KIAA0408Q6ZU52 694 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 EIF3MQ7L2H7 374 aaKnown RBP15.43■□□□□ 0.06
SRPK1-201ENST00000346162 MILR1Q7Z6M3 343 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 PYROXD2Q8N2H3 581 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 HAPLN3Q96S86 360 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 EMC3Q9P0I2 261 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 S100A6P06703 90 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 ANXA6P08133 673 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 LBPP18428 481 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 CLIP4Q8N3C7 705 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 CCDC185Q8N715 623 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 ZNF420Q8TAQ5 688 aaPredicted RBP15.43■□□□□ 0.06
SRPK1-201ENST00000346162 FAM45AQ8TCE6 357 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 EFHD2Q96C19 240 aaPredicted RBP15.43■□□□□ 0.06
SRPK1-201ENST00000346162 BORCS6Q96GS4 357 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 SERAC1Q96JX3 654 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 SACM1LQ9NTJ5 587 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 ENOPH1Q9UHY7 261 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 SF3B1O75533 1304 aaKnown RBP eCLIP15.43■□□□□ 0.062e-7■■■■■ 52.8
SRPK1-201ENST00000346162 CENPBD1B2RD01 187 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 ADSLP30566 484 aaPredicted RBP15.43■□□□□ 0.06
SRPK1-201ENST00000346162 IDH3AP50213 366 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 HECTD3Q5T447 861 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 C11orf88Q6PI97 169 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 NIPA2Q8N8Q9 360 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 SMAD5Q99717 465 aaKnown RBP15.43■□□□□ 0.06
SRPK1-201ENST00000346162 TBCDQ9BTW9 1192 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 PDE10AQ9Y233 779 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 SLC27A5Q9Y2P5 690 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 CST1P01037 141 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 SMPD1P17405 629 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 GM2AP17900 193 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 PLD1Q13393 1074 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 SH3PXD2AQ5TCZ1 1133 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 SYCE2Q6PIF2 218 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 HDAC10Q969S8 669 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 CAMKK2Q96RR4 588 aa15.43■□□□□ 0.06
SRPK1-201ENST00000346162 OXCT2Q9BYC2 517 aaPredicted RBP15.43■□□□□ 0.06
SRPK1-201ENST00000346162 ISPDA4D126 451 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 OR6C70A6NIJ9 312 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 TMEM63AO94886 807 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 FGFR1P11362 822 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 NOVP48745 357 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 OLR1P78380 273 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 INSCQ1MX18 579 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 TRIM71Q2Q1W2 868 aaKnown RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 COLEC12Q5KU26 742 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 TXNRD3NBQ6F5E7 133 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 TRUB1Q8WWH5 349 aaKnown RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 ADAM7Q9H2U9 754 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 UXTQ9UBK9 157 aaPredicted RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 PTBP2Q9UKA9 531 aaKnown RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 MGAT4DA6NG13 374 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 KCNU1A8MYU2 1149 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 GCATO75600 419 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 STK40Q8N2I9 435 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 NKAPQ8N5F7 415 aaKnown RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 CNTD1Q8N815 330 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 ASB12Q8WXK4 309 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 KLHL5Q96PQ7 755 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 IFT80Q9P2H3 777 aaPredicted RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 HMGXB4Q9UGU5 601 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 DNMT3LQ9UJW3 386 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 MSI1O43347 362 aaKnown RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 ZNF806P0C7X5 589 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 HNRNPLP14866 589 aaKnown RBP eCLIP15.42■□□□□ 0.061e-6■■□□□ 13.8
SRPK1-201ENST00000346162 TCF4P15884 667 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 MPSTP25325 297 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 ECHS1P30084 290 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 RRM2P31350 389 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 ZNF267Q14586 743 aaPredicted RBP15.42■□□□□ 0.06
SRPK1-201ENST00000346162 RUNDC3AQ59EK9 446 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 STXBP5Q5T5C0 1151 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 COPS4Q9BT78 406 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 PCDHAC1Q9H158 963 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 TPK1Q9H3S4 243 aa15.42■□□□□ 0.06
SRPK1-201ENST00000346162 GNG14A0A1W2PPG7 69 aa15.41■□□□□ 0.06
SRPK1-201ENST00000346162 SCAMP3O14828 347 aaKnown RBP15.41■□□□□ 0.06
SRPK1-201ENST00000346162 CPSF4O95639 269 aaKnown RBP15.41■□□□□ 0.06
SRPK1-201ENST00000346162 TSPAN8P19075 237 aa15.41■□□□□ 0.06
SRPK1-201ENST00000346162 BOP1Q14137 746 aaKnown RBP15.41■□□□□ 0.06
SRPK1-201ENST00000346162 TSNQ15631 228 aaKnown RBP15.41■□□□□ 0.06
SRPK1-201ENST00000346162 NLGN2Q8NFZ4 835 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms