RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ZCCHC12Q6PEW1 402 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 AHSA2Q719I0 299 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 TRAPPC5Q8IUR0 188 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 DENND6BQ8NEG7 585 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 SPATA20Q8TB22 786 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 NEK7Q8TDX7 302 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 EPS8L1Q8TE68 723 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 KAT8Q9H7Z6 458 aaKnown RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 SNCAIPQ9Y6H5 919 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 CEP170BQ9Y4F5 1589 aaPredicted RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 TRBC1P01850 177 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 IFNW1P05000 195 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 LLGL2Q6P1M3 1020 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 UNC5AQ6ZN44 842 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 TPK1Q9H3S4 243 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 GAKO14976 1311 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 PDLIM1O00151 329 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 CALCAP01258 141 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 RASGEF1AQ8N9B8 481 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 C9orf43Q8TAL5 461 aaPredicted RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 ELMO1Q92556 727 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 PPCDCQ96CD2 204 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 AGXT2Q9BYV1 514 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 GTPBP1O00178 669 aaKnown RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 GIMD1P0DJR0 217 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 RBL1P28749 1068 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 ATXN7L2Q5T6C5 722 aaPredicted RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 FBXO33Q7Z6M2 555 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 UNC93B1Q9H1C4 597 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 ALG5Q9Y673 324 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 SLC27A1Q6PCB7 646 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 TOP1MTQ969P6 601 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 TUFMP49411 452 aaKnown RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 MANFP55145 182 aaKnown RBP19.29■□□□□ 0.68
HDAC4-201ENST00000345617 FER1L6Q2WGJ9 1857 aa19.29■□□□□ 0.68
HDAC4-201ENST00000345617 CHMP1AQ9HD42 196 aaPredicted RBP19.28■□□□□ 0.68
HDAC4-201ENST00000345617 ALOX15BO15296 676 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 MID1O15344 667 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 RALGDSQ12967 914 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 RAB11FIP2Q7L804 512 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 TKTL2Q9H0I9 626 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 NDUFS2O75306 463 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 TPH1P17752 444 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 ORC1Q13415 861 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CHSY3Q70JA7 882 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CUZD1Q86UP6 607 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 TIGD4Q8IY51 512 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 ADGRG2Q8IZP9 1017 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CIB1Q99828 191 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 UNKQ9C0B0 810 aaKnown RBP19.28■□□□□ 0.68
HDAC4-201ENST00000345617 KIF13AQ9H1H9 1805 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 TPSB2P20231 275 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 PNLIPRP1P54315 467 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 TPSAB1Q15661 275 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CPNE9Q8IYJ1 553 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 OR52K1Q8NGK4 314 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 PIGXQ8TBF5 258 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 GPRC5CQ9NQ84 441 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CYB5AP00167 134 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CXCL8P10145 99 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CA9Q16790 459 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 PABPC1LQ4VXU2 614 aaKnown RBP19.28■□□□□ 0.68
HDAC4-201ENST00000345617 TUBA1CQ9BQE3 449 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 PLEKHG4Q58EX7 1191 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 FAM76BQ5HYJ3 339 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 TMEM126BQ8IUX1 230 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 UNC5BQ8IZJ1 945 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 TMEM168Q9H0V1 697 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 PTPRUQ92729 1446 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 FPGTO14772 594 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 XYLBO75191 536 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 SLC5A3P53794 718 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 RBM15BQ8NDT2 890 aaKnown RBP19.28■□□□□ 0.68
HDAC4-201ENST00000345617 AGBL3Q8NEM8 1001 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CELF6Q96J87 481 aaKnown RBP19.28■□□□□ 0.68
HDAC4-201ENST00000345617 ZNF285Q96NJ3 590 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 CIPCQ9C0C6 399 aa19.28■□□□□ 0.68
HDAC4-201ENST00000345617 THUMPD1Q9NXG2 353 aaKnown RBP19.28■□□□□ 0.68
HDAC4-201ENST00000345617 PRR5P85299 388 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 CHRDL2Q6WN34 429 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 PHF13Q86YI8 300 aaPredicted RBP19.27■□□□□ 0.68
HDAC4-201ENST00000345617 OR52K2Q8NGK3 314 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 LGALS13Q9UHV8 139 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 SLC9A3P48764 834 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 TCEAL6Q6IPX3 200 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 CXorf57Q6NSI4 855 aaKnown RBP19.27■□□□□ 0.68
HDAC4-201ENST00000345617 C11orf65Q8NCR3 313 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 CHST7Q9NS84 486 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 TMEM9Q9P0T7 183 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 MTRRQ9UBK8 725 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 IPO13O94829 963 aaKnown RBP19.27■□□□□ 0.68
HDAC4-201ENST00000345617 AP5B1Q2VPB7 878 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 BEND7Q8N7W2 519 aaPredicted RBP19.27■□□□□ 0.68
HDAC4-201ENST00000345617 KLK14Q9P0G3 267 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 NCKAP1Q9Y2A7 1128 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 ACKR2O00590 384 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 MVKQ03426 396 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 GCNT6Q5T4J0 391 aa19.27■□□□□ 0.68
HDAC4-201ENST00000345617 LRRN4CLQ8ND94 238 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms