RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 OR2AP1Q8NGE2 309 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 LCN9Q8WX39 176 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 RETREG1Q9H6L5 497 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 LINC01553A4QN01 128 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 SEC24DO94855 1032 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 MT-CYBP00156 380 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 ALBP02768 609 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 ASGR2P07307 311 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 PTGER3P43115 390 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 CCNHP51946 323 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 ZC3H14Q6PJT7 736 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 OLFML1Q6UWY5 402 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 SERPINA9Q86WD7 417 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 DSELQ8IZU8 1212 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 TXNDC5Q8NBS9 432 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 SRFBP1Q8NEF9 429 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 NELL2Q99435 816 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 TRMOQ9BU70 441 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 GPR174Q9BXC1 333 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 CHRAC1Q9NRG0 131 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 XPR1Q9UBH6 696 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 CCDC189A1A4V9 331 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 NUDT17P0C025 328 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 PSMA3P25788 255 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 NSG1P42857 185 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 GNPDA1P46926 289 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 C8orf33Q9H7E9 229 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 CIDEBQ9UHD4 219 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 CCL22O00626 93 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 ERFP50548 548 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 LAPTM5Q13571 262 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 CA9Q16790 459 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 ACTRT2Q8TDY3 377 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 DNAJC11Q9NVH1 559 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 MRASO14807 208 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 OGNP20774 298 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 HSPA13P48723 471 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 CCT8P50990 548 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 SCUBE1Q8IWY4 988 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 OXNAD1Q96HP4 312 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 TTLL2Q9BWV7 592 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 WDR6Q9NNW5 1121 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 KCNK4Q9NYG8 393 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 ESR1P03372 595 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 GABRB2P47870 512 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 CCINQ13939 588 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 CCDC142Q17RM4 750 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 CPT1BQ92523 772 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 FGF13Q92913 245 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 KLC4Q9NSK0 619 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 PRKAG3Q9UGI9 489 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 SLC7A4O43246 635 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 TMEM220Q6QAJ8 160 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 RIPOR1Q6ZS17 1223 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 AVL9Q8NBF6 648 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 MRPL48Q96GC5 212 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF711Q9Y462 761 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF840PA6NDX5 716 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 HIDE1A8MVS5 230 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 FFAR3O14843 346 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 GPR42O15529 346 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 FFAR2O15552 330 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 SLC30A9Q6PML9 568 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 KLHDC7BQ96G42 594 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF232Q9UNY5 417 aa16.31■□□□□ 0.2
SMARCA4-201ENST00000344626 KCNH1O95259 989 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 AFF1P51825 1210 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 SLC16A1P53985 500 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 DHCR24Q15392 516 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 GPR33Q49SQ1 333 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 PHF19Q5T6S3 580 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 INTS11Q5TA45 600 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 DCAF4L2Q8NA75 395 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 PIWIL2Q8TC59 973 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 PCBD2Q9H0N5 130 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 CORO2BQ9UQ03 480 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 TMEM265A0A087WTH1 108 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 KIAA0355O15063 1070 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 OAZ2O95190 189 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 ACVRL1P37023 503 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 MSANTD2Q6P1R3 559 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 PRSS58Q8IYP2 241 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 KIF2BQ8N4N8 673 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 TTC9BQ8N6N2 239 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 CDYL2Q8N8U2 506 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 NSMCE2Q96MF7 247 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 RAB11FIP5Q9BXF6 653 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 RAP2CQ9Y3L5 183 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF780BQ9Y6R6 833 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 ADH1BP00325 375 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 GSTM1P09488 218 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 ACP5P13686 325 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 GRIA2P42262 883 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 ATP13A5Q4VNC0 1218 aa16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 FAM98BQ52LJ0 330 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 ZC3H3Q8IXZ2 948 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-201ENST00000344626 SIX5Q8N196 739 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms