RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SVOPLQ8N434 492 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 TMEM199Q8N511 208 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 PLD5Q8N7P1 536 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 KDM1BQ8NB78 822 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 KBTBD8Q8NFY9 601 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 LHFPL5Q8TAF8 219 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 TRPM4Q8TD43 1214 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 STYXQ8WUJ0 223 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 FCGR1BQ92637 280 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 POP5Q969H6 163 aaKnown RBP8.1□□□□□ -1.11
ATG4A-201ENST00000343524 NCLNQ969V3 563 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 REXO5Q96IC2 774 aaKnown RBP8.1□□□□□ -1.11
ATG4A-201ENST00000343524 METTL2AQ96IZ6 378 aaKnown RBP8.1□□□□□ -1.11
ATG4A-201ENST00000343524 CITED4Q96RK1 184 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 CYP2S1Q96SQ9 504 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 CGRRF1Q99675 332 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 FAM213AQ9BRX8 229 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 KIFC1Q9BW19 673 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 IDI2Q9BXS1 227 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 TRIM39Q9HCM9 518 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 ANKEF1Q9NU02 776 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 MTMR10Q9NXD2 777 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 B3GNT2Q9NY97 397 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 ABI2Q9NYB9 513 aaPredicted RBP8.1□□□□□ -1.11
ATG4A-201ENST00000343524 USE1Q9NZ43 259 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 CCDC167Q9P0B6 97 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 KCNH4Q9UQ05 1017 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 SIPA1L1O43166 1804 aa8.1□□□□□ -1.11
ATG4A-201ENST00000343524 METTL15A6NJ78 407 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 HACD1B0YJ81 288 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 RNF223E7ERA6 249 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 hCG_2039718K7EN88 272 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 NME4O00746 187 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 XYLBO75191 536 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 LTFP02788 710 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ALPLP05186 524 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ASNSP08243 561 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PRKACAP17612 351 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CYP2A7P20853 494 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CFL1P23528 166 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SHMT2P34897 504 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GMPRP36959 345 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ETV6P41212 452 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SERPINH1P50454 418 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ETV1P50549 477 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 NAGLUP54802 743 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 DNAJB13P59910 316 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ACTR2P61160 394 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GEN1Q17RS7 908 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PIK3R6Q5UE93 754 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TMEM236Q5W0B7 351 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TIGD3Q6B0B8 471 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 DENND5AQ6IQ26 1287 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CYP20A1Q6UW02 462 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CREB3L2Q70SY1 520 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 BEND5Q7L4P6 421 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 NIPA1Q7RTP0 329 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF438Q7Z4V0 828 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 STRA8Q7Z7C7 330 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CMC1Q7Z7K0 106 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ZBTB33Q86T24 672 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GATAD2AQ86YP4 633 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 LURAP1LQ8IV03 231 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 NIM1KQ8IY84 436 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 FBXL6Q8N531 539 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 DEFB123Q8N688 67 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CYP2W1Q8TAV3 490 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ZFAND1Q8TCF1 268 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TSPEARQ8WU66 669 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SLC22A17Q8WUG5 538 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 FAR1Q8WVX9 515 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 GMCL1Q96IK5 515 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ST6GAL2Q96JF0 529 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SCYL1Q96KG9 808 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 QKIQ96PU8 341 aaKnown RBP eCLIP8.09□□□□□ -1.115e-8■■■■■ 36.1
ATG4A-201ENST00000343524 P2RX7Q99572 595 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 BTBD2Q9BX70 525 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CCDC90BQ9GZT6 254 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 NUAK2Q9H093 628 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ZNF556Q9HAH1 456 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SCN3BQ9NY72 215 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 TAS2R9Q9NYW1 312 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SFMBT1Q9UHJ3 866 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 DNMT3LQ9UJW3 386 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 C3orf18Q9UK00 162 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 INTS6Q9UL03 887 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 POLHQ9Y253 713 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ORC6Q9Y5N6 252 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 H0YC42 278 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 INPP4BO15327 924 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 OR7A10O76100 309 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 INMTO95050 263 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 PRSS23O95084 383 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 SLC4A1P02730 911 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 C2P06681 752 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CD1EP15812 388 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 ALOX12P18054 663 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 CES1P23141 567 aa8.09□□□□□ -1.11
ATG4A-201ENST00000343524 YWHABP31946 246 aaKnown RBP8.09□□□□□ -1.11
ATG4A-201ENST00000343524 RYKP34925 604 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms