RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 KCNB2Q92953 911 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 RAB7BQ96AH8 199 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 TAAR6Q96RI8 345 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 TCF12Q99081 682 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 KRTAP4-12Q9BQ66 201 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 POLDIP3Q9BY77 421 aaKnown RBP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 SPRTNQ9H040 489 aaPredicted RBP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 RWDD1Q9H446 243 aaPredicted RBP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 SNX7Q9UNH6 387 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 COQ6Q9Y2Z9 468 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 CCDC78A2IDD5 438 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 ZNF233A6NK53 670 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 SNAP91O60641 907 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 CUTAO60888 179 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 TBCAO75347 108 aaKnown RBP11.05□□□□□ -0.64
ATXN3-201ENST00000340660 IFNA2P01563 188 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 CD19P15391 556 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 TNNI1P19237 187 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 PRKDCP78527 4128 aaKnown RBP11.05□□□□□ -0.64
ATXN3-201ENST00000340660 GSTM4Q03013 218 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 RAPGEF1Q13905 1077 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 ZNF667Q5HYK9 610 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 DNAAF3Q8N9W5 541 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 ACCSQ96QU6 501 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 LRFN1Q9P244 771 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 VPS28Q9UK41 221 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 EXOC7Q9UPT5 735 aa11.05□□□□□ -0.64
ATXN3-201ENST00000340660 INTS1Q8N201 2190 aaKnown RBP11.04□□□□□ -0.64
ATXN3-201ENST00000340660 A0A096LPE4 126 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 A0A1W2PPZ6 126 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 MOCS2O96007 188 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-201ENST00000340660 ITIH2P19823 946 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 TACR2P21452 398 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 MYBPHQ13203 477 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 EXOSC6Q5RKV6 272 aaKnown RBP11.04□□□□□ -0.64
ATXN3-201ENST00000340660 IZUMO3Q5VZ72 239 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 SLC30A9Q6PML9 568 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 PAMR1Q6UXH9 720 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 SPOCD1Q6ZMY3 1216 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 ENDOVQ8N8Q3 282 aaKnown RBP11.04□□□□□ -0.64
ATXN3-201ENST00000340660 PLA2G15Q8NCC3 412 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 LARP4BQ92615 738 aaKnown RBP11.04□□□□□ -0.64
ATXN3-201ENST00000340660 CNDP1Q96KN2 507 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 PSMB7Q99436 277 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 SLC38A3Q99624 504 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 WRAP53Q9BUR4 548 aaKnown RBP11.04□□□□□ -0.64
ATXN3-201ENST00000340660 TCFL5Q9UL49 500 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 MEMO1Q9Y316 297 aa11.04□□□□□ -0.64
ATXN3-201ENST00000340660 DRGXA6NNA5 263 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 TULP2O00295 520 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 SLC19A2O60779 497 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 ATE1O95260 518 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 PCCBP05166 539 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 KRT18P05783 430 aaKnown RBP11.03□□□□□ -0.64
ATXN3-201ENST00000340660 GKP32189 559 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 SEPHS1P49903 392 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 CASP5P51878 434 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 GP2P55259 537 aaKnown RBP11.03□□□□□ -0.64
ATXN3-201ENST00000340660 GFERP55789 205 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 KIAA1024LP59773 190 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 PCDH1Q08174 1060 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 SPRED3Q2MJR0 410 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 LCN10Q6JVE6 187 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 PWWP2BQ6NUJ5 590 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 CHSY1Q86X52 802 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 PPP1R3BQ86XI6 285 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 CXorf40AQ8TE69 158 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 COG1Q8WTW3 980 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 WASF1Q92558 559 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 VOPP1Q96AW1 172 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 HEPHQ9BQS7 1158 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 C19orf24Q9BVV8 132 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 GSDMCQ9BYG8 508 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-201ENST00000340660 SUDS3Q9H7L9 328 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-201ENST00000340660 LIN7BQ9HAP6 207 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 C1GALT1Q9NS00 363 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 ABCC13Q9NSE7 274 aa11.03□□□□□ -0.64
ATXN3-201ENST00000340660 PRSS38A1L453 326 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 TNFRSF10CO14798 259 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 CLSTN1O94985 981 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 MST1P26927 711 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 FASLGP48023 281 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 IRAK1P51617 712 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 CASP6P55212 293 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 TFF3Q07654 80 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 DMPKQ09013 629 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 PRKD1Q15139 912 aaPredicted RBP11.02□□□□□ -0.65
ATXN3-201ENST00000340660 RPUSD3Q6P087 351 aaKnown RBP11.02□□□□□ -0.65
ATXN3-201ENST00000340660 IGFL2Q6UWQ7 119 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 CA5BP1Q8WTZ4 195 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 CCDC127Q96BQ5 260 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 SLC39A13Q96H72 371 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 GPATCH1Q9BRR8 931 aaKnown RBP11.02□□□□□ -0.65
ATXN3-201ENST00000340660 UBXN6Q9BZV1 441 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 CHST8Q9H2A9 424 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 MOSPD1Q9UJG1 213 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 CYP46A1Q9Y6A2 500 aa11.02□□□□□ -0.65
ATXN3-201ENST00000340660 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.01□□□□□ -0.654e-12■■■□□ 18.3
ATXN3-201ENST00000340660 TCAF2A6NFQ2 919 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms