RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PANX2Q96RD6 677 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 GORASP1Q9BQQ3 440 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 SEMA6CQ9H3T2 930 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 SYNDIG1Q9H7V2 258 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 C10orf88Q9H8K7 445 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 UBP1Q9NZI7 540 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 SHOC2Q9UQ13 582 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 EPN1Q9Y6I3 576 aaPredicted RBP16.92■□□□□ 0.3
BRCC3-202ENST00000340647 SDK2Q58EX2 2172 aa16.92■□□□□ 0.3
BRCC3-202ENST00000340647 LOC285095A0A1B0GVY8 99 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 A6NCN8 305 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 C1QL1O75973 258 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 NDUFA10O95299 355 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 CD1CP29017 333 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 CA5AP35218 305 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 UGT1A5P35504 534 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 ETV5P41161 510 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 INHBCP55103 352 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 PCBP4P57723 403 aaKnown RBP16.91■□□□□ 0.3
BRCC3-202ENST00000340647 CDK18Q07002 472 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 ILF3Q12906 894 aaKnown RBP eCLIP16.91■□□□□ 0.34e-6■■■■□ 22.7
BRCC3-202ENST00000340647 PCSK7Q16549 785 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 TFDP3Q5H9I0 405 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 OXNAD1Q96HP4 312 aaPredicted RBP16.91■□□□□ 0.3
BRCC3-202ENST00000340647 FAM83DQ9H4H8 585 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 RDH14Q9HBH5 336 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 MAGEE1Q9HCI5 957 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 ARFGAP3Q9NP61 516 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 DNPEPQ9ULA0 475 aa16.91■□□□□ 0.3
BRCC3-202ENST00000340647 RGSL1A5PLK6 1076 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 RRP8O43159 456 aaKnown RBP16.9■□□□□ 0.3
BRCC3-202ENST00000340647 TNFSF15O95150 251 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 BPIP17213 487 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 NFKB1P19838 968 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 CA4P22748 312 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 ACTR1BP42025 376 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 ACTR1AP61163 376 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 TFDP2Q14188 446 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 KHDC1Q4VXA5 237 aaKnown RBP16.9■□□□□ 0.3
BRCC3-202ENST00000340647 AADACL2Q6P093 401 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 FOXR1Q6PIV2 292 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 LRRC69Q6ZNQ3 347 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 ZC3H18Q86VM9 953 aaKnown RBP16.9■□□□□ 0.3
BRCC3-202ENST00000340647 RCOR2Q8IZ40 523 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 ZNF567Q8N184 647 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 KIAA1524Q8TCG1 905 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 TFB1MQ8WVM0 346 aaKnown RBP16.9■□□□□ 0.3
BRCC3-202ENST00000340647 MRGPRX2Q96LB1 330 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 NUDT22Q9BRQ3 303 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 ADGRE3Q9BY15 652 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 ZFYVE1Q9HBF4 777 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 EPB41L5Q9HCM4 733 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 VPS18Q9P253 973 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 ATXN10Q9UBB4 475 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 NFKBIL1Q9UBC1 381 aaPredicted RBP16.9■□□□□ 0.3
BRCC3-202ENST00000340647 ZNF711Q9Y462 761 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 CFAP46Q8IYW2 2715 aa16.9■□□□□ 0.3
BRCC3-202ENST00000340647 PRR19A6NJB7 356 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 EIF4E1BA6NMX2 242 aaKnown RBP16.89■□□□□ 0.29
BRCC3-202ENST00000340647 PLD2O14939 933 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 EFSO43281 561 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 PMPCBO75439 489 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 ZRANB2O95218 330 aaKnown RBP eCLIP16.89■□□□□ 0.29
BRCC3-202ENST00000340647 NDST3O95803 873 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 PYGLP06737 847 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 ITIH1P19827 911 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 CSF2RBP32927 897 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 CHRNA4P43681 627 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 ARSDP51689 593 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 C16orf72Q14CZ0 275 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 PPP2R5EQ16537 467 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 BBS12Q6ZW61 710 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 USP53Q70EK8 1073 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 RAB11FIP2Q7L804 512 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 TTC30BQ8N4P2 665 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 LRRC57Q8N9N7 239 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 ACRBPQ8NEB7 543 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 SLC37A2Q8TED4 501 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 QKIQ96PU8 341 aaKnown RBP eCLIP16.89■□□□□ 0.29
BRCC3-202ENST00000340647 HEMGNQ9BXL5 484 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 CPNE5Q9HCH3 593 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 THSD1Q9NS62 852 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 HAUS2Q9NVX0 235 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 PKD2L2Q9NZM6 624 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 TBC1D29Q9UFV1 150 aa16.89■□□□□ 0.29
BRCC3-202ENST00000340647 TRBV23OR9-2A0A075B6M9 112 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 F5H423 210 aaPredicted RBP16.88■□□□□ 0.29
BRCC3-202ENST00000340647 AGRPO00253 132 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 NUAK1O60285 661 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 ITGA2BP08514 1039 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 ZNF8P17098 575 aaPredicted RBP16.88■□□□□ 0.29
BRCC3-202ENST00000340647 CTNNA1P35221 906 aaKnown RBP16.88■□□□□ 0.29
BRCC3-202ENST00000340647 WNT3AP56704 352 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 DCDC1P59894 354 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 CLN3Q13286 438 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.88■□□□□ 0.29
BRCC3-202ENST00000340647 NKAIN2Q5VXU1 208 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 ALS2CLQ60I27 953 aa16.88■□□□□ 0.29
BRCC3-202ENST00000340647 ZNF761Q86XN6 746 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms