RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ARHGEF17Q96PE2 2063 aaPredicted RBP15.3■□□□□ 0.04
VAPA-201ENST00000340541 ALS2CR12Q96Q35 445 aa15.3■□□□□ 0.04
VAPA-201ENST00000340541 FERMT1Q9BQL6 677 aa15.3■□□□□ 0.04
VAPA-201ENST00000340541 TMEM168Q9H0V1 697 aa15.3■□□□□ 0.04
VAPA-201ENST00000340541 FAM83DQ9H4H8 585 aa15.3■□□□□ 0.04
VAPA-201ENST00000340541 CYP4F12Q9HCS2 524 aa15.3■□□□□ 0.04
VAPA-201ENST00000340541 OPA1O60313 960 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 ZNF189O75820 626 aaPredicted RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 ANXA9O76027 345 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 STK10O94804 968 aaKnown RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 AGTP01019 485 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 PTMAP06454 111 aaKnown RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 PYGLP06737 847 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 ANXA6P08133 673 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 CTSEP14091 401 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 HLA-DPA1P20036 260 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 ITPKBP27987 946 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 GEMP55040 296 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 DCDC1P59894 354 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 OLIG2Q13516 323 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 SIX1Q15475 284 aaPredicted RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 OASLQ15646 514 aaKnown RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 TBC1D25Q3MII6 688 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 SEL1L2Q5TEA6 688 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 LVRNQ6Q4G3 990 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 RANBP10Q6VN20 620 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 SLC25A41Q8N5S1 370 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 CCL4L1Q8NHW4 92 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 GRAMD1AQ96CP6 724 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 HIC2Q96JB3 615 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 PDLIM2Q96JY6 352 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 ZNF578Q96N58 590 aaPredicted RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 SRPK1Q96SB4 655 aaKnown RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 TMEM121Q9BTD3 319 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 FICDQ9BVA6 458 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 GPR63Q9BZJ6 419 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 CARS2Q9HA77 564 aaKnown RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 SUFUQ9UMX1 484 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 TMEM98Q9Y2Y6 226 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 ST14Q9Y5Y6 855 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 OAS3Q9Y6K5 1087 aaKnown RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 RP1P56715 2156 aa15.29■□□□□ 0.04
VAPA-201ENST00000340541 COL27A1Q8IZC6 1860 aaPredicted RBP15.29■□□□□ 0.04
VAPA-201ENST00000340541 ATXN7O15265 892 aaPredicted RBP15.28■□□□□ 0.04
VAPA-201ENST00000340541 INPP4BO15327 924 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 LIASO43766 372 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 BRINP1O60477 761 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 DXOO77932 396 aaKnown RBP15.28■□□□□ 0.04
VAPA-201ENST00000340541 METTL18O95568 372 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 SLC4A1P02730 911 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 FGF1P05230 155 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 IVLP07476 585 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 BPIP17213 487 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 HMGCLP35914 325 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 MSLNQ13421 630 aaPredicted RBP15.28■□□□□ 0.04
VAPA-201ENST00000340541 GUSBP11Q6P575 273 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 DOK6Q6PKX4 331 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 GKN2Q86XP6 184 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 NRROSQ86YC3 692 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 REXO1L1PQ8IX06 675 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 GPBAR1Q8TDU6 330 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 RTP4Q96DX8 246 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 DEPDC7Q96QD5 511 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 FSD1LQ9BXM9 530 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 CDH19Q9H159 772 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 TRABDQ9H4I3 376 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 MOSPD1Q9UJG1 213 aa15.28■□□□□ 0.04
VAPA-201ENST00000340541 AAR2Q9Y312 384 aaKnown RBP15.28■□□□□ 0.04
VAPA-201ENST00000340541 PCYT1BQ9Y5K3 369 aaPredicted RBP15.28■□□□□ 0.04
VAPA-201ENST00000340541 BPTFQ12830 3046 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 EME2A4GXA9 379 aaPredicted RBP15.27■□□□□ 0.04
VAPA-201ENST00000340541 ATP1A1P05023 1023 aaKnown RBP15.27■□□□□ 0.04
VAPA-201ENST00000340541 GNPDA1P46926 289 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 ERVPABLB-1P60509 514 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 C19orf57Q0VDD7 668 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 PARP6Q2NL67 630 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 ALS2CLQ60I27 953 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 KCTD11Q693B1 232 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 DENND5AQ6IQ26 1287 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 SFTPA2Q8IWL1 248 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 TRAM1L1Q8N609 369 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 KYQ8NBH2 561 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 C1orf54Q8WWF1 131 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 CRELD1Q96HD1 420 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 APOL2Q9BQE5 337 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 ABCG4Q9H172 646 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 RAD18Q9NS91 495 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 TRNAU1APQ9NX07 287 aaKnown RBP15.27■□□□□ 0.04
VAPA-201ENST00000340541 HACD3Q9P035 362 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 IL17CQ9P0M4 197 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 VPS18Q9P253 973 aa15.27■□□□□ 0.04
VAPA-201ENST00000340541 ZFC3H1O60293 1989 aaKnown RBP15.27■□□□□ 0.03
VAPA-201ENST00000340541 ZNF106Q9H2Y7 1883 aaKnown RBP15.27■□□□□ 0.03
VAPA-201ENST00000340541 TEX51A0A1B0GUA7 166 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 DNAJC6O75061 913 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 LSSP48449 732 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 PRPSAP1Q14558 356 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 NR0B2Q15466 257 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 PYCR3Q53H96 274 aa15.26■□□□□ 0.03
VAPA-201ENST00000340541 PERM1Q5SV97 790 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms