RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ADH1CP00326 375 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 SLC7A2P52569 658 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 SLC20A2Q08357 652 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 DLG1Q12959 904 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 SLC25A52Q3SY17 297 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 CNTD1Q8N815 330 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 RIT1Q92963 219 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 SSU72Q9NP77 194 aaKnown RBP13.04□□□□□ -0.32
HLCS-201ENST00000336648 CUEDC1Q9NWM3 386 aaPredicted RBP13.04□□□□□ -0.32
HLCS-201ENST00000336648 MAT2BQ9NZL9 334 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 CALML5Q9NZT1 146 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 MAN2B2Q9Y2E5 1009 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 SERPINA3P01011 423 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 MC4RP32245 332 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 MANFP55145 182 aaKnown RBP13.04□□□□□ -0.32
HLCS-201ENST00000336648 UBAP2LQ14157 1087 aaKnown RBP13.04□□□□□ -0.32
HLCS-201ENST00000336648 EARS2Q5JPH6 523 aaKnown RBP13.04□□□□□ -0.32
HLCS-201ENST00000336648 MFSD5Q6N075 450 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 THAP5Q7Z6K1 395 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 DENND1CQ8IV53 801 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 C10orf107Q8IVU9 208 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 C7orf26Q96N11 449 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 PDGFDQ9GZP0 370 aaPredicted RBP13.04□□□□□ -0.32
HLCS-201ENST00000336648 GLOD4Q9HC38 313 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 DNAJC11Q9NVH1 559 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 MRPS23Q9Y3D9 190 aaKnown RBP13.04□□□□□ -0.32
HLCS-201ENST00000336648 C5orf60A6NFR6 353 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 PER2O15055 1255 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 ADCYAP1R1P41586 468 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 CDH4P55283 916 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 WNT3AP56704 352 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 MBTD1Q05BQ5 628 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 ELP6Q0PNE2 266 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 NDUFA9Q16795 377 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 TMEM44Q2T9K0 475 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 NOL9Q5SY16 702 aaKnown RBP13.04□□□□□ -0.32
HLCS-201ENST00000336648 LCN1P1Q5VSP4 162 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 ANKRD26P1Q6NSI1 321 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 MYO19Q96H55 970 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 MARK4Q96L34 752 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 MFSD14AQ96MC6 490 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 FERD3LQ96RJ6 166 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 CST11Q9H112 138 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 KCNN2Q9H2S1 579 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 NUDT4Q9NZJ9 180 aa13.04□□□□□ -0.32
HLCS-201ENST00000336648 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 TULP3O75386 442 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 C9P02748 559 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 IGFALSP35858 605 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 LARS2Q15031 903 aaKnown RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 DET1Q7L5Y6 550 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ERMAPQ96PL5 475 aaPredicted RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 TAS2R14Q9NYV8 317 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ADGRE2Q9UHX3 823 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 MSRAQ9UJ68 235 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ABCA9Q8IUA7 1624 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 SMIM10L2AP0DMW4 78 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 SMIM10L2BP0DMW5 78 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 GOT1P17174 413 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ATP13A4Q4VNC1 1196 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 GPR156Q8NFN8 814 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 OR2T34Q8NGX1 318 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 OR2T3Q8NH03 318 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 SPPL2BQ8TCT7 592 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 FADS3Q9Y5Q0 445 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 GRM6O15303 877 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ENTPD5O75356 428 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ERAL1O75616 437 aaKnown RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 LINC00032P0C843 101 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 CTSKP43235 329 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 S100A12P80511 92 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 UBE2R2Q712K3 238 aaPredicted RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 PNPT1Q8TCS8 783 aaKnown RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 NEK7Q8TDX7 302 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ADAMTS15Q8TE58 950 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 GIN1Q9NXP7 522 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 GPN3Q9UHW5 284 aaPredicted RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 ASF1AQ9Y294 204 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 POLR3HQ9Y535 204 aaPredicted RBP13.03□□□□□ -0.32
HLCS-201ENST00000336648 A0A0J9YYE9 177 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 TRBC1P01850 177 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 EPHA3P29320 983 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ZNF697Q5TEC3 545 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 JAZF1Q86VZ6 243 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 DNAJB8Q8NHS0 232 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 HDAC10Q969S8 669 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 TRIM2Q9C040 744 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 SCELO95171 688 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 CCNE2O96020 404 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ASLP04424 464 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 GPIP06744 558 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 KIR3DL1P43629 444 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 NUMBP49757 651 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 KCNJ2P63252 427 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 DDR1Q08345 913 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 ABRQ12979 859 aa13.03□□□□□ -0.32
HLCS-201ENST00000336648 NOMO1Q15155 1222 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms