RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PRRT4C9JH25 899 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 POP4O95707 220 aaKnown RBP15.81■□□□□ 0.12
PDGFB-201ENST00000331163 PDE1CQ14123 709 aaPredicted RBP15.81■□□□□ 0.12
PDGFB-201ENST00000331163 KRT33BQ14525 404 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 PSAPL1Q6NUJ1 521 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 C10orf107Q8IVU9 208 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 CPA6Q8N4T0 437 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 BRSK1Q8TDC3 778 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 RHBDL2Q9NX52 303 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 CDH7Q9ULB5 785 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 CA14Q9ULX7 337 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 STARD13Q9Y3M8 1113 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 ATP6AP2A0A1C7CYW4 349 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 B2RBV5 119 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 CCDC22O60826 627 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 ATP6AP2O75787 350 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 ACADMP11310 421 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 MLNP12872 115 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 ACADSP16219 412 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 ETV3P41162 512 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 DDX39BQ13838 428 aaKnown RBP15.81■□□□□ 0.12
PDGFB-201ENST00000331163 CHRNA6Q15825 494 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 DUSP6Q16828 381 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 DDIASQ8IXT1 998 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 CCDC124Q96CT7 223 aaKnown RBP15.81■□□□□ 0.12
PDGFB-201ENST00000331163 THTPAQ9BU02 230 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 NMRAL1Q9HBL8 299 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 SENP1Q9P0U3 644 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 ERVW-1Q9UQF0 538 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 AP3B1O00203 1094 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 RNASEH1O60930 286 aaKnown RBP15.81■□□□□ 0.12
PDGFB-201ENST00000331163 IGLV3-27P01718 113 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 APODP05090 189 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 FOSL2P15408 326 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 HTR7P34969 479 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 SKIV2L2P42285 1042 aaKnown RBP15.81■□□□□ 0.12
PDGFB-201ENST00000331163 IHHQ14623 411 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 PDGFRLQ15198 375 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 IRGCQ6NXR0 463 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 SIDT2Q8NBJ9 832 aaKnown RBP15.81■□□□□ 0.12
PDGFB-201ENST00000331163 MDGA1Q8NFP4 955 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 FIBINQ8TAL6 211 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 ZNF398Q8TD17 642 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 RTP4Q96DX8 246 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 APOPT1Q96IL0 206 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 TRIM55Q9BYV6 548 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 PLA2G2FQ9BZM2 168 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 VWA7Q9Y334 891 aa15.81■□□□□ 0.12
PDGFB-201ENST00000331163 FAM83EQ2M2I3 478 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 SYTL3Q4VX76 610 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 TNFAIP8L3Q5GJ75 292 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 WASHC2DQ5SRD0 308 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 GRTP1Q5TC63 336 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 FAM219BQ5XKK7 198 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 ASB16Q96NS5 453 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 BOCQ9BWV1 1114 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 TDRD1Q9BXT4 1180 aaKnown RBP15.8■□□□□ 0.12
PDGFB-201ENST00000331163 FBRSL1Q9HCM7 1045 aaKnown RBP15.8■□□□□ 0.12
PDGFB-201ENST00000331163 RNF112Q9ULX5 631 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 ZNF711Q9Y462 761 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 SIN3BO75182 1162 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 WFS1O76024 890 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 PSMG1O95456 288 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 PAK4O96013 591 aaPredicted RBP15.8■□□□□ 0.12
PDGFB-201ENST00000331163 ABHD2P08910 425 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 PIK3CGP48736 1102 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 SYCE2Q6PIF2 218 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 GDPD4Q6W3E5 623 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 RINLQ6ZS11 566 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 PIANPQ8IYJ0 282 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 C10orf82Q8WW14 230 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 INPP5DQ92835 1189 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 NMD3Q96D46 503 aaKnown RBP15.8■□□□□ 0.12
PDGFB-201ENST00000331163 MARK4Q96L34 752 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 PRDM16Q9HAZ2 1276 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 FZD3Q9NPG1 666 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 PSMD13Q9UNM6 376 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 LATO43561 262 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 FGF19O95750 216 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 SLC34A1Q06495 639 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 SERPINA9Q86WD7 417 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 CPNE9Q8IYJ1 553 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 RIBC1Q8N443 379 aaPredicted RBP15.8■□□□□ 0.12
PDGFB-201ENST00000331163 SNX31Q8N9S9 440 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 PIP4K2CQ8TBX8 421 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 CFAP20Q9Y6A4 193 aaKnown RBP15.8■□□□□ 0.12
PDGFB-201ENST00000331163 SIP14410 1827 aa15.8■□□□□ 0.12
PDGFB-201ENST00000331163 GLYATL1P3A0A0U1RQE8 302 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 ZCWPW2A0A1B0GU75 182 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 A0A1W2PP55 124 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 A0A1W2PQ67 120 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 KRT87PA6NCN2 255 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 NPIPB15A6NHN6 443 aaPredicted RBP15.79■□□□□ 0.12
PDGFB-201ENST00000331163 MOSPD3O75425 235 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 VPS26AO75436 327 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 RPP40O75818 363 aaKnown RBP15.79■□□□□ 0.12
PDGFB-201ENST00000331163 RALBP11234 206 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 CCNFP41002 786 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 BST1Q10588 318 aa15.79■□□□□ 0.12
PDGFB-201ENST00000331163 ABRQ12979 859 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms