RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 GIMAP4Q9NUV9 329 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 SCN3BQ9NY72 215 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 IL37Q9NZH6 218 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 OPTCQ9UBM4 332 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 TLR6Q9Y2C9 796 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 AFG3L2Q9Y4W6 797 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 SOWAHBA6NEL2 793 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 XYLBO75191 536 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 STMN1P16949 149 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 ACOT2P49753 483 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 WNT7BP56706 349 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 SNAP25P60880 206 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 RAB10P61026 200 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 INCA1Q0VD86 236 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 SPP2Q13103 211 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 PLA2G4EQ3MJ16 856 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 ZNF470Q6ECI4 717 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 SCARA5Q6ZMJ2 495 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 KCNMB4Q86W47 210 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 SNX29P2Q8IUI4 249 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 CCDC117Q8IWD4 279 aaPredicted RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 ERLEC1Q96DZ1 483 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 MASTLQ96GX5 879 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 SNRNP25Q9BV90 132 aaKnown RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 B3GNT4Q9C0J1 378 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 TOR3AQ9H497 397 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 CYP3A43Q9HB55 503 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 DNAJB9Q9UBS3 223 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 ZMAT5Q9UDW3 170 aaKnown RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 ANKRD31Q8N7Z5 1873 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 DOCK5Q9H7D0 1870 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 G3V2T6 193 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 DDX39AO00148 427 aaKnown RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 PSMD3O43242 534 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 ARHGEF9O43307 516 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TBX1O43435 398 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CA12O43570 354 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 AP2A1O95782 977 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 PGK2P07205 417 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 FGF4P08620 206 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 IL7P13232 177 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 ARL1P40616 181 aaPredicted RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 GSK3BP49841 420 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CDH13P55290 713 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 RPS6P62753 249 aaKnown RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 SLC35A2P78381 396 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CD47Q08722 323 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CLCA4Q14CN2 919 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 FSCN1Q16658 493 aaKnown RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 UGCGQ16739 394 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TSTD2Q5T7W7 516 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CDC42EP5Q6NZY7 148 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 LETMD1Q6P1Q0 360 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CREB3L2Q70SY1 520 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 ZNF438Q7Z4V0 828 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CUZD1Q86UP6 607 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 PIGZQ86VD9 579 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TCTE3Q8IZS6 198 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CENPLQ8N0S6 344 aaPredicted RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 ZFAND1Q8TCF1 268 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 LPAR1Q92633 364 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 ZNF669Q96BR6 464 aaPredicted RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 TBC1D20Q96BZ9 403 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 COA1Q9GZY4 146 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 NIPAL2Q9H841 368 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 LIN7BQ9HAP6 207 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 ZFP14Q9HCL3 533 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 SDR39U1Q9NRG7 319 aaPredicted RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 B3GNT2Q9NY97 397 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 GTSE1Q9NYZ3 720 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 XPR1Q9UBH6 696 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 STOML2Q9UJZ1 356 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 VANGL2Q9ULK5 521 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 PCDHA10Q9Y5I2 948 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 LOC100130705A0A1B0GUX0 176 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 A0A1W2PP18 115 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 ERVH48-1M5A8F1 160 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TPST1O60507 370 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 IPO13O94829 963 aaKnown RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 CST3P01034 146 aaPredicted RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 SLC4A1P02730 911 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 RBP1P09455 135 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 NPR1P16066 1061 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CYP2A7P20853 494 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 SLC26A3P40879 764 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 MAGEA11P43364 429 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TUFMP49411 452 aaKnown RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 BAMBIQ13145 260 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TNK1Q13470 666 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 KEAP1Q14145 624 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 USP10Q14694 798 aaKnown RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 SHROOM1Q2M3G4 852 aaPredicted RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 SNAP47Q5SQN1 464 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TPRG1LQ5T0D9 272 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CNSTQ6PJW8 725 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TBPL2Q6SJ96 375 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 RAB44Q7Z6P3 723 aaPredicted RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 GLRX5Q86SX6 157 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 RAB43Q86YS6 212 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms