RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 IL2P60568 153 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 MYLK3Q32MK0 819 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 TRMT5Q32P41 509 aaKnown RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 GPR33Q49SQ1 333 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 ZNF697Q5TEC3 545 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 C22orf39Q6P5X5 142 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 PAQR3Q6TCH7 311 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 SNX20Q7Z614 316 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 NET1Q7Z628 596 aaPredicted RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 SCUBE1Q8IWY4 988 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 PIANPQ8IYJ0 282 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 ENDOVQ8N8Q3 282 aaKnown RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 RP9Q8TA86 221 aaKnown RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 GUCD1Q96NT3 240 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 SAMD11Q96NU1 681 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 GPR21Q99679 349 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 RTKNQ9BST9 563 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 MEAF6Q9HAF1 191 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 BPIFA1Q9NP55 256 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 HCFC1R1Q9NWW0 138 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 NDE1Q9NXR1 346 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 NOP53Q9NZM5 478 aaKnown RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 RNF112Q9ULX5 631 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 PLA2G4CQ9UP65 541 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 FAM50BQ9Y247 325 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 PPIL1Q9Y3C6 166 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 EYSQ5T1H1 3165 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 C1orf232A0A0U1RR37 186 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 LINC01553A4QN01 128 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 RGSL1A5PLK6 1076 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 STX16-NPEPL1H3BU86 382 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 STX16O14662 325 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 MOSPD3O75425 235 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 POP4O95707 220 aaKnown RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 PABPC1P11940 636 aaKnown RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 COX4I1P13073 169 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 CTPS1P17812 591 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 IRX1P78414 480 aaPredicted RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 FAM109BQ6ICB4 259 aaPredicted RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 USP45Q70EL2 814 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 RBFAQ8N0V3 343 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 PTGR2Q8N8N7 351 aaPredicted RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 PDLIM5Q96HC4 596 aaKnown RBP19.17■□□□□ 0.66
CHMP6-201ENST00000325167 BBS2Q9BXC9 721 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 P2RY12Q9H244 342 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 MARK1Q9P0L2 795 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 GNPTGQ9UJJ9 305 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 CLEC4EQ9ULY5 219 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 MED16Q9Y2X0 877 aa19.17■□□□□ 0.66
CHMP6-201ENST00000325167 NEMP1O14524 444 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 ZNF821O75541 412 aaPredicted RBP19.16■□□□□ 0.66
CHMP6-201ENST00000325167 FGF4P08620 206 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 PRSS56P0CW18 603 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 GFAPP14136 432 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 HNRNPLP14866 589 aaKnown RBP eCLIP19.16■□□□□ 0.66
CHMP6-201ENST00000325167 NFKBIAP25963 317 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 EPHA3P29320 983 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 HLA-FP30511 346 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 CCR10P46092 362 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 ZNF77Q15935 545 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 PDCD2Q16342 344 aaPredicted RBP19.16■□□□□ 0.66
CHMP6-201ENST00000325167 CRY1Q16526 586 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 UNC50Q53HI1 259 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 DGKKQ5KSL6 1271 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 NXNQ6DKJ4 435 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 CLYBLQ8N0X4 340 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 FBXO39Q8N4B4 442 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 PNPLA1Q8N8W4 532 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 ECHDC3Q96DC8 303 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 ANKRD27Q96NW4 1050 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 CLPBQ9H078 707 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 SMG9Q9H0W8 520 aaKnown RBP19.16■□□□□ 0.66
CHMP6-201ENST00000325167 WDR55Q9H6Y2 383 aaPredicted RBP19.16■□□□□ 0.66
CHMP6-201ENST00000325167 SPHK2Q9NRA0 654 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 TRAF6Q9Y4K3 522 aa19.16■□□□□ 0.66
CHMP6-201ENST00000325167 SDHDO14521 159 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 CLASP2O75122 1294 aaKnown RBP19.15■□□□□ 0.66
CHMP6-201ENST00000325167 PEX11AO75192 247 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 RFPL2O75678 378 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 CHRM3P20309 590 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 HNF1BP35680 557 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 CPOXP36551 454 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 SPAM1P38567 509 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 ECT2LQ008S8 904 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 OR4D1Q15615 310 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 FUT11Q495W5 492 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 CARD16Q5EG05 197 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 CTSL3PQ5NE16 218 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 TPRG1Q6ZUI0 275 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 EFL1Q7Z2Z2 1120 aaKnown RBP19.15■□□□□ 0.66
CHMP6-201ENST00000325167 STMN2Q93045 179 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 TCEAL4Q96EI5 215 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 SMIM14Q96QK8 99 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 C1QTNF3Q9BXJ4 246 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 SUV39H2Q9H5I1 410 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 ZNF385DQ9H6B1 395 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 CD248Q9HCU0 757 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 CCL26Q9Y258 94 aa19.15■□□□□ 0.66
CHMP6-201ENST00000325167 SUPT3HB4E1H0 165 aa19.14■□□□□ 0.66
CHMP6-201ENST00000325167 NEDD8-MDP1E9PL57 170 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms