RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 PRSS21Q9Y6M0 314 aa18.31■□□□□ 0.52
USP39-201ENST00000323701 MUC22E2RYF6 1773 aaPredicted RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 GLYATL1P3A0A0U1RQE8 302 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 APOA4P06727 396 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 LAMP2P13473 410 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 PKMP14618 531 aaKnown RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 TIMP2P16035 220 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 GRK2P25098 689 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 BMP8BP34820 402 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 RUNX3Q13761 415 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 PDGFRLQ15198 375 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 GALNTL6Q49A17 601 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 LIPMQ5VYY2 423 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 FAM219BQ5XKK7 198 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 SIDT2Q8NBJ9 832 aaKnown RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 WFIKKN2Q8TEU8 576 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 EBF4Q9BQW3 602 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 FBRSL1Q9HCM7 1045 aaKnown RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 CYP4F12Q9HCS2 524 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 THG1LQ9NWX6 298 aaKnown RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 IL36AQ9UHA7 158 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 CD84Q9UIB8 345 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 TRIOBPQ9H2D6 2365 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 ARFIP2P53365 341 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 AQP5P55064 265 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 PDAP1Q13442 181 aaKnown RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 OR4D1Q15615 310 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 MTDHQ86UE4 582 aaKnown RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 ZNF781Q8N8C0 355 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 AGR3Q8TD06 166 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 SCG3Q8WXD2 468 aaKnown RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 ERP27Q96DN0 273 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 SHCBP1LQ9BZQ2 653 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 PLA2G4CQ9UP65 541 aa18.3■□□□□ 0.52
USP39-201ENST00000323701 OAS3Q9Y6K5 1087 aaKnown RBP18.3■□□□□ 0.52
USP39-201ENST00000323701 KIAA1549LQ6ZVL6 1849 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 TRBV5-4A0A0C4DH59 114 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 ASLP04424 464 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 PFKPQ01813 784 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 ACAP2Q15057 778 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 CTC1Q2NKJ3 1217 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 SNX20Q7Z614 316 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 LSMEM2Q8N112 164 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 STK40Q8N2I9 435 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 TERB1Q8NA31 727 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 ACOX2Q99424 681 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 PCDH12Q9NPG4 1184 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 CLDND1Q9NY35 253 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 TAS2R13Q9NYV9 303 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 HEY2Q9UBP5 337 aa18.29■□□□□ 0.52
USP39-201ENST00000323701 MBD1Q9UIS9 605 aaPredicted RBP18.29■□□□□ 0.52
USP39-201ENST00000323701 A8MT66 165 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 TSPAN12O95859 305 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 HOXB8P17481 243 aaPredicted RBP18.28■□□□□ 0.52
USP39-201ENST00000323701 SERPINB3P29508 390 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 SPAM1P38567 509 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 PTGER3P43115 390 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 SOX9P48436 509 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 VASPP50552 380 aaPredicted RBP18.28■□□□□ 0.52
USP39-201ENST00000323701 LACTB2Q53H82 288 aaPredicted RBP18.28■□□□□ 0.52
USP39-201ENST00000323701 C9orf64Q5T6V5 341 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 BRAT1Q6PJG6 821 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 HSD11B1LQ7Z5J1 315 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 TTC7BQ86TV6 843 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 ALYREFQ86V81 257 aaKnown RBP18.28■□□□□ 0.52
USP39-201ENST00000323701 PIWIL2Q8TC59 973 aaKnown RBP18.28■□□□□ 0.52
USP39-201ENST00000323701 ZNF398Q8TD17 642 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 LKAAEAR1Q8TD35 194 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 CD200R1Q8TD46 325 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 PBXIP1Q96AQ6 731 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 CCDC68Q9H2F9 335 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 TMPRSS11EQ9UL52 423 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 PLK4O00444 970 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 ZNF195O14628 629 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 PSMC3P17980 439 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 SLC26A3P40879 764 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 ZNF234Q14588 700 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 ATP13A5Q4VNC0 1218 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 FNDC3BQ53EP0 1204 aaKnown RBP18.28■□□□□ 0.52
USP39-201ENST00000323701 VWA5B1Q5TIE3 1220 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 CBARPQ8N350 705 aaPredicted RBP18.28■□□□□ 0.52
USP39-201ENST00000323701 PHF21BQ96EK2 531 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 TMEM237Q96Q45 408 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 ITM2BQ9Y287 266 aa18.28■□□□□ 0.52
USP39-201ENST00000323701 C16orf96A6NNT2 1141 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 ACRV1P26436 265 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 GDI1P31150 447 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 SCTRP47872 440 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 ADARP55265 1226 aaKnown RBP18.27■□□□□ 0.52
USP39-201ENST00000323701 ST8SIA6P61647 398 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 ZNF805Q5CZA5 627 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 ARL13AQ5H913 290 aaPredicted RBP18.27■□□□□ 0.52
USP39-201ENST00000323701 AARS2Q5JTZ9 985 aaKnown RBP18.27■□□□□ 0.52
USP39-201ENST00000323701 CES5AQ6NT32 575 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 PARS2Q7L3T8 475 aaKnown RBP18.27■□□□□ 0.52
USP39-201ENST00000323701 SCAMP4Q969E2 229 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 LRRC37BQ96QE4 947 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 POPDC3Q9HBV1 291 aa18.27■□□□□ 0.52
USP39-201ENST00000323701 SARS2Q9NP81 518 aaKnown RBP18.27■□□□□ 0.52
USP39-201ENST00000323701 APPL1Q9UKG1 709 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms