RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SMOXQ9NWM0 555 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 TMEM9Q9P0T7 183 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 PDE10AQ9Y233 779 aa12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 POLR3HQ9Y535 204 aaPredicted RBP12.69□□□□□ -0.38
DNMT3A-202ENST00000321117 ANKRD33BA6NCL7 494 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 SOCS2O14508 198 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ASNA1O43681 348 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 AP1G1O43747 822 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 CNOT3O75175 753 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 RHOCP08134 193 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 TXNL4AP83876 142 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 DDR2Q16832 855 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 PIM3Q86V86 326 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 TMEM132CQ8N3T6 1108 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 NPWQ8N729 165 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ANKFN1Q8N957 763 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 VPS37AQ8NEZ2 397 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 PSMA8Q8TAA3 256 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 NCSTNQ92542 709 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 HBEGFQ99075 208 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ABCB10Q9NRK6 738 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 LMCD1Q9NZU5 365 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 RBPJLQ9UBG7 517 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 UBA2Q9UBT2 640 aaPredicted RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 CEPT1Q9Y6K0 416 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 JUNP05412 331 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 CXCR3P49682 368 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 EEFSECP57772 596 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 BEX3Q00994 111 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 DDX39BQ13838 428 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 DAG1Q14118 895 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 TSNQ15631 228 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 CHST15Q7LFX5 561 aaPredicted RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ACVR1CQ8NER5 493 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 SLC47A1Q96FL8 570 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 NODALQ96S42 347 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ROGDIQ9GZN7 287 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 FAM105AQ9NUU6 356 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 OPTCQ9UBM4 332 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 GMPPBQ9Y5P6 360 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 TLL2Q9Y6L7 1015 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 RGS5O15539 181 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 GOT2P00505 430 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ALOX5P09917 674 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 SMIM18P0DKX4 95 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 UROSP10746 265 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 MAPK1P28482 360 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 RPL9P32969 192 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 TTPAP49638 278 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 CLCNKBP51801 687 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 RUNX1T1Q06455 604 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 MOGQ16653 247 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 HPS1Q92902 700 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 GPR21Q99679 349 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ANKRD60Q9BZ19 345 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 OSBPL2Q9H1P3 480 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 MEAF6Q9HAF1 191 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ATP13A1Q9HD20 1204 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 BEST1O76090 585 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 IRF1P10914 325 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF182P17025 639 aaPredicted RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 PFKPQ01813 784 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 AP5B1Q2VPB7 878 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 CES4AQ5XG92 561 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 CYP4V2Q6ZWL3 525 aaPredicted RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ESAMQ96AP7 390 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 LRRC3Q9BY71 257 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 TLR8Q9NR97 1041 aaKnown RBP12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 CACNG4Q9UBN1 327 aa12.68□□□□□ -0.38
DNMT3A-202ENST00000321117 BOLA2-SMG1P6H3BVE0 249 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 PIRO00625 290 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 MED26O95402 600 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 CPSF4O95639 269 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 HSMCR30P0CW71 290 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 ITGALP20701 1170 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 CD68P34810 354 aaPredicted RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 RAB39AQ14964 217 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 CTXN3Q4LDR2 81 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 EXOC2Q96KP1 924 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 RBM4BQ9BQ04 359 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 RBM4Q9BWF3 364 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 GNPTGQ9UJJ9 305 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 PSME2Q9UL46 239 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 GABRDO14764 452 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 IRAK2O43187 625 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 RSL1D1O76021 490 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 OR4F21O95013 312 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 C8BP07358 591 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 ZNF7P17097 686 aaPredicted RBP12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 ALOX12P18054 663 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 ATP4BP51164 291 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 MTPNP58546 118 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 C1QTNF8P60827 252 aa12.67□□□□□ -0.38
DNMT3A-202ENST00000321117 NRG1Q02297 640 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms