RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 RAD18Q9NS91 495 aa17.73■□□□□ 0.43
RAB39A-201ENST00000320578 ZFP69BQ9UJL9 534 aa17.73■□□□□ 0.43
RAB39A-201ENST00000320578 SORCS3Q9UPU3 1222 aa17.73■□□□□ 0.43
RAB39A-201ENST00000320578 RGSL1A5PLK6 1076 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 MYO1CO00159 1063 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 RFXAPO00287 272 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 BNIP3LO60238 219 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 ACRV1P26436 265 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 EIF2DP41214 584 aaKnown RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 NAGLUP54802 743 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 ZNF805Q5CZA5 627 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 LRRC66Q68CR7 880 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 VITQ6UXI7 678 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 CLNKQ7Z7G1 428 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 MTDHQ86UE4 582 aaKnown RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 TSPAN33Q86UF1 283 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 TXNDC5Q8NBS9 432 aaKnown RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 PDLIM5Q96HC4 596 aaKnown RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 TRMOQ9BU70 441 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 CDH19Q9H159 772 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 TXLNGQ9NUQ3 528 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 NFKBIL1Q9UBC1 381 aaPredicted RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 KIF26AQ9ULI4 1882 aaPredicted RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 A0A0U1RQS6 177 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 ANKRD65E5RJM6 399 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 ZNF195O14628 629 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 HNRNPCL1O60812 293 aaKnown RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 CCDC22O60826 627 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 LEFTY1O75610 366 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 TPBGLP0DKB5 382 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 VIPR1P32241 457 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 NAA20P61599 178 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 PREPLQ4J6C6 727 aaPredicted RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 PAQR3Q6TCH7 311 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 FAM151BQ6UXP7 276 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 PHTF2Q8N3S3 785 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 SORCS1Q8WY21 1168 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 ELSPBP1Q96BH3 223 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 ULK4Q96C45 1275 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 L3HYPDHQ96EM0 354 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 GPR21Q99679 349 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 S1PR5Q9H228 398 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 B4GALT6Q9UBX8 382 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 VTI1BQ9UEU0 232 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 TRMT6Q9UJA5 497 aaKnown RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 TMCO1Q9UM00 188 aa17.72■□□□□ 0.43
RAB39A-201ENST00000320578 APOBEC2Q9Y235 224 aaKnown RBP17.72■□□□□ 0.43
RAB39A-201ENST00000320578 ZNF106Q9H2Y7 1883 aaKnown RBP17.71■□□□□ 0.43
RAB39A-201ENST00000320578 A8MT66 165 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 UPK3BL1B0FP48 263 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 UPK3BL2E5RIL1 263 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 LINC01565O15544 149 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 OR1I1O60431 355 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 SMIM24O75264 130 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 UNC5CO95185 931 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 CHRM1P11229 460 aaPredicted RBP17.71■□□□□ 0.43
RAB39A-201ENST00000320578 IMPDH1P20839 514 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 LHCGRP22888 699 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 DCDC1P59894 354 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 ZBTB16Q05516 673 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 KRT72Q14CN4 511 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 CRY1Q16526 586 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 ARSIQ5FYB1 569 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 CES5AQ6NT32 575 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 MACC1Q6ZN28 852 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 TRIM67Q6ZTA4 783 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 TDHQ8IZJ6 230 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 STAG3L4Q8TBR4 150 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 CLPBQ9H078 707 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 POMKQ9H5K3 350 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 PNPOQ9NVS9 261 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 PKD2L2Q9NZM6 624 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 KLHL42Q9P2K6 505 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 MARCOQ9UEW3 520 aaPredicted RBP17.71■□□□□ 0.43
RAB39A-201ENST00000320578 GNPTGQ9UJJ9 305 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 DHRS7Q9Y394 339 aa17.71■□□□□ 0.43
RAB39A-201ENST00000320578 LAMA2P24043 3122 aaKnown RBP17.71■□□□□ 0.43
RAB39A-201ENST00000320578 CCDC85CA6NKD9 419 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 PRRT4C9JH25 899 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 ZBTB14O43829 449 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 KERAO60938 352 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 PRNPP04156 253 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 KITP10721 976 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 TIMP2P16035 220 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 SERPINB3P29508 390 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 SLC6A11P48066 632 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 SPINT3P49223 89 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 RPL14P50914 215 aaKnown RBP17.7■□□□□ 0.42
RAB39A-201ENST00000320578 RUNX3Q13761 415 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 CHRNA6Q15825 494 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 HNRNPA1L2Q32P51 320 aaKnown RBP17.7■□□□□ 0.42
RAB39A-201ENST00000320578 ARL13AQ5H913 290 aaPredicted RBP17.7■□□□□ 0.42
RAB39A-201ENST00000320578 NXPE1Q8N323 547 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 GPR26Q8NDV2 337 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 TMIEQ8NEW7 156 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 CD200R1Q8TD46 325 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 PBXIP1Q96AQ6 731 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 PTERQ96BW5 349 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 ZFYVE19Q96K21 471 aa17.7■□□□□ 0.42
RAB39A-201ENST00000320578 ATOH8Q96SQ7 321 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms