RNA–Protein interactions for RNA: ENST00000319294.10

UBASH3A-202, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 2,504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-202ENST00000319294 STON2Q8WXE9 905 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 USP13Q92995 863 aaPredicted RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 TOP1MTQ969P6 601 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 DGCR14Q96DF8 476 aaKnown RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 L3HYPDHQ96EM0 354 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 TRMT2BQ96GJ1 504 aaKnown RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 TMEM169Q96HH4 297 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 ATOH8Q96SQ7 321 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 MEAF6Q9HAF1 191 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 FBRSL1Q9HCM7 1045 aaKnown RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 LHX3Q9UBR4 397 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 MYOCOSA0A1B0GUC4 107 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 CCDC160A6NGH7 325 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 CAPN8A6NHC0 703 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 H0Y626 953 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 TFAP2AP05549 437 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 ENO3P13929 434 aaPredicted RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 RAG1P15918 1043 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 THOP1P52888 689 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 FOXA1P55317 472 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 HPCAP84074 193 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 RFTN1Q14699 578 aaPredicted RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 PTPRNQ16849 979 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 GRAMD1BQ3KR37 738 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 UGT3A2Q3SY77 523 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 PAOXQ6QHF9 649 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 ZNF689Q96CS4 500 aaPredicted RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 EID2BQ96D98 161 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 ZNF558Q96NG5 402 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 BIRC8Q96P09 236 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 FEM1AQ9BSK4 669 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 RETREG1Q9H6L5 497 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 EML4Q9HC35 981 aaKnown RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 GIMAP2Q9UG22 337 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 OR51B4Q9Y5P0 310 aa12.32□□□□□ -0.44
UBASH3A-202ENST00000319294 PDE4DIPQ5VU43 2346 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 C2orf81A6NN90 581 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CDC7O00311 574 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 SRP72O76094 671 aaKnown RBP12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CDK14O94921 469 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 XRCC1P18887 633 aaPredicted RBP12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 ITGB8P26012 769 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 HERVK_113P63132 956 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CEACAM7Q14002 265 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 RAB33AQ14088 237 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CNKSR3Q6P9H4 555 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 TTC30BQ8N4P2 665 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 OR6K2Q8NGY2 324 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CCDC97Q96F63 343 aaPredicted RBP12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 GPR21Q99679 349 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 ERVK-6Q9BXR3 956 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 UBAP1Q9NZ09 502 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 PTTG2Q9NZH5 202 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 ATP11BQ9Y2G3 1177 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 A0A0J9YVX5 310 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 NIPSNAP2O75323 286 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 NDUFS3O75489 264 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CTPS1P17812 591 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 LPOP22079 712 aaPredicted RBP12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 TPP2P29144 1249 aaPredicted RBP12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 MC4RP32245 332 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CSKP41240 450 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 MS4A2Q01362 244 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 GK3PQ14409 553 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 TSNQ15631 228 aaKnown RBP12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 NADK2Q4G0N4 442 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 AFTPHQ6ULP2 937 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 APCDD1Q8J025 514 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 ALG14Q96F25 216 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 PHF12Q96QT6 1004 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 KCNA7Q96RP8 456 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 INTS10Q9NVR2 710 aaKnown RBP12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 VPS51Q9UID3 782 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 STOML2Q9UJZ1 356 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 VPS28Q9UK41 221 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 TBX21Q9UL17 535 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CLEC4EQ9ULY5 219 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 INSL5Q9Y5Q6 135 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 CPQQ9Y646 472 aa12.31□□□□□ -0.44
UBASH3A-202ENST00000319294 H3BNX3 289 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 SLC22A2O15244 555 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 SMAD6O43541 496 aaKnown RBP12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 ATP6V1B1P15313 513 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 PSMA3P25788 255 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 ADSLP30566 484 aaPredicted RBP12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 GKP32189 559 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 ATXN3P54252 364 aaPredicted RBP12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 CYP4F8P98187 520 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 NFKB2Q00653 900 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 GALNT1Q10472 559 aaPredicted RBP12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 HERC3Q15034 1050 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 ZNF423Q2M1K9 1284 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 PIGGQ5H8A4 983 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 HERC6Q8IVU3 1022 aa12.3□□□□□ -0.44
UBASH3A-202ENST00000319294 OR9I1Q8NGQ6 314 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms