RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SKAP2O75563 359 aaPredicted RBP18.25■□□□□ 0.51
CCDC43-201ENST00000315286 SIX3O95343 332 aaPredicted RBP18.25■□□□□ 0.51
CCDC43-201ENST00000315286 SERPINA4P29622 427 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 CA5AP35218 305 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 RAP1GDS1P52306 607 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 PFKFB4Q16877 469 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 MYLK3Q32MK0 819 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 FAM219BQ5XKK7 198 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 GRASPQ7Z6J2 395 aaPredicted RBP18.25■□□□□ 0.51
CCDC43-201ENST00000315286 GIMAP7Q8NHV1 300 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 STAG3L4Q8TBR4 150 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 WDR60Q8WVS4 1066 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 MAELQ96JY0 434 aaKnown RBP18.25■□□□□ 0.51
CCDC43-201ENST00000315286 LENG8Q96PV6 779 aaPredicted RBP18.25■□□□□ 0.51
CCDC43-201ENST00000315286 TRMOQ9BU70 441 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 P2RY12Q9H244 342 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 SLCO3A1Q9UIG8 710 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 SCN8AQ9UQD0 1980 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 LRRC14BA6NHZ5 514 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 IQCF5A8MTL0 148 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CDC7O00311 574 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 KERAO60938 352 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 TM7SF2O76062 418 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 COX4I1P13073 169 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CHRM3P20309 590 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CD9P21926 228 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 HOXA9P31269 272 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 ADARP55265 1226 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CDH13P55290 713 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 ATP6V0D1P61421 351 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 BTKQ06187 659 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 KPNB1Q14974 876 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 TSNQ15631 228 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 ACCSLQ4AC99 568 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 KHDC1Q4VXA5 237 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 PRSS36Q5K4E3 855 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 C22orf39Q6P5X5 142 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 NKAPQ8N5F7 415 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CD200R1Q8TD46 325 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 ISG20Q96AZ6 181 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CCDC97Q96F63 343 aaPredicted RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 FAM161BQ96MY7 647 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CATSPER2Q96P56 530 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 ZNF385DQ9H6B1 395 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 TRMT6Q9UJA5 497 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 RNF112Q9ULX5 631 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 RWDD3Q9Y3V2 267 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CXorf51AA0A1B0GTR3 108 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CAPN8A6NHC0 703 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 PRAMEF1O95521 474 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 TSPAN12O95859 305 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 ESR1P03372 595 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 PABPC1P11940 636 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 TYRP14679 529 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 PRDX6P30041 224 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 SEMG2Q02383 582 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CBX2Q14781 532 aaPredicted RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 ZNF77Q15935 545 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 SCUBE1Q8IWY4 988 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CPSF7Q8N684 471 aaKnown RBP18.24■□□□□ 0.51
CCDC43-201ENST00000315286 KCNJ9Q92806 393 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 FAR2Q96K12 515 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 RNPEPL1Q9HAU8 725 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 IL26Q9NPH9 171 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 SPHK2Q9NRA0 654 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 TRAF6Q9Y4K3 522 aa18.24■□□□□ 0.51
CCDC43-201ENST00000315286 CCDC189A1A4V9 331 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 C5orf67F2Z3F1 127 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 XYLBO75191 536 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 GFAPP14136 432 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 PIK3R1P27986 724 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 C1QTNF8P60827 252 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 EML3Q32P44 896 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 LY6G5CQ5SRR4 150 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 RAB44Q7Z6P3 723 aaPredicted RBP18.23■□□□□ 0.51
CCDC43-201ENST00000315286 TSPAN33Q86UF1 283 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 SERPINA9Q86WD7 417 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 ULK2Q8IYT8 1036 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 STK40Q8N2I9 435 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 EEF1AKMT1Q8WVE0 214 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 FUBP1Q96AE4 644 aaKnown RBP18.23■□□□□ 0.51
CCDC43-201ENST00000315286 MARK4Q96L34 752 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 ASB8Q9H765 288 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 SARS2Q9NP81 518 aaKnown RBP18.23■□□□□ 0.51
CCDC43-201ENST00000315286 SLC25A13Q9UJS0 675 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 COMMD10Q9Y6G5 202 aa18.23■□□□□ 0.51
CCDC43-201ENST00000315286 NPEPPSL1A6NEC2 478 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 NPIPB15A6NHN6 443 aaPredicted RBP18.22■□□□□ 0.51
CCDC43-201ENST00000315286 SUPT3HB4E1H0 165 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 E5RI56 91 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 PPP6CO00743 305 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 PRMT5O14744 637 aaPredicted RBP18.22■□□□□ 0.51
CCDC43-201ENST00000315286 SUPT3HO75486 399 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 ECI2O75521 394 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 HNRNPA1P09651 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCDC43-201ENST00000315286 BPIP17213 487 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 ACSBG2Q5FVE4 666 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 CLEC6AQ6EIG7 209 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 CERS6Q6ZMG9 384 aa18.22■□□□□ 0.51
CCDC43-201ENST00000315286 CPNE9Q8IYJ1 553 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms