RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 SF3A2Q15428 464 aaKnown RBP12.8□□□□□ -0.36
APTX-201ENST00000309615 DNAJC21Q5F1R6 531 aaKnown RBP12.8□□□□□ -0.36
APTX-201ENST00000309615 PRAMEF14Q5SWL7 426 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 ZNF398Q8TD17 642 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 DTX3LQ8TDB6 740 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 IFT81Q8WYA0 676 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 STAMBPL1Q96FJ0 436 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 HIC2Q96JB3 615 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 FCRL3Q96P31 734 aaPredicted RBP12.8□□□□□ -0.36
APTX-201ENST00000309615 WDR83Q9BRX9 315 aaKnown RBP12.8□□□□□ -0.36
APTX-201ENST00000309615 NUSAP1Q9BXS6 441 aaKnown RBP12.8□□□□□ -0.36
APTX-201ENST00000309615 FAM96AQ9H5X1 160 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 CAAP1Q9H8G2 361 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 ARFGAP3Q9NP61 516 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 PARD6AQ9NPB6 346 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 SEMA4GQ9NTN9 838 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 APPL1Q9UKG1 709 aa12.8□□□□□ -0.36
APTX-201ENST00000309615 FAM237BA0A1B0GVD1 139 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 MAGEB16A2A368 324 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 CCDC162PA2VCL2 907 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 TMEM202A6NGA9 273 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 CACNB4O00305 520 aaPredicted RBP12.79□□□□□ -0.36
APTX-201ENST00000309615 TOR1BO14657 336 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 MAGEC1O60732 1142 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 SLU7O95391 586 aaKnown RBP12.79□□□□□ -0.36
APTX-201ENST00000309615 PRSS56P0CW18 603 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 TGM1P22735 817 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 ELK3P41970 407 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 CTSKP43235 329 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 CAV1Q03135 178 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 PDIA2Q13087 525 aaKnown RBP12.79□□□□□ -0.36
APTX-201ENST00000309615 NFATC2Q13469 925 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 FZD2Q14332 565 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 NFATC4Q14934 902 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 FASTKD3Q14CZ7 662 aaKnown RBP12.79□□□□□ -0.36
APTX-201ENST00000309615 KCTD16Q68DU8 428 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 PDPK2PQ6A1A2 396 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 BTN2A2Q8WVV5 523 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 PEX13Q92968 403 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 GLYATL1Q969I3 302 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 COX14Q96I36 57 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 EBNA1BP2Q99848 306 aaKnown RBP12.79□□□□□ -0.36
APTX-201ENST00000309615 ASB8Q9H765 288 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 GDF3Q9NR23 364 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 PHPT1Q9NRX4 125 aaPredicted RBP12.79□□□□□ -0.36
APTX-201ENST00000309615 FAM114A2Q9NRY5 505 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 PNMA8BQ9ULN7 279 aaPredicted RBP12.79□□□□□ -0.36
APTX-201ENST00000309615 OAS3Q9Y6K5 1087 aaKnown RBP12.79□□□□□ -0.36
APTX-201ENST00000309615 RPS6KL1Q9Y6S9 549 aa12.79□□□□□ -0.36
APTX-201ENST00000309615 LNP1A1A4G5 178 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 E7ESA3 106 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 SLC25A14O95258 325 aaPredicted RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 HOXC4P09017 264 aaPredicted RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 ENGP17813 658 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ARNTP27540 789 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 HTR1BP28222 390 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 POLD2P49005 469 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 CARSP49589 748 aaKnown RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 CDKN1CP49918 316 aaPredicted RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 KIAA1024LP59773 190 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 PRAMEP78395 509 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ITGA9Q13797 1035 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 SMAD1Q15797 465 aaKnown RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 CSRP2Q16527 193 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ANKRD20A4Q4UJ75 823 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ZRANB3Q5FWF4 1079 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ZNF648Q5T619 568 aaPredicted RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 ARMC3Q5W041 872 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ENPP7Q6UWV6 458 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 MACC1Q6ZN28 852 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 DCP2Q8IU60 420 aaKnown RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 ANKMY2Q8IV38 441 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 OR2I1PQ8NGU4 316 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 OR6P1Q8NGX9 317 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ZNF669Q96BR6 464 aaPredicted RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 VPS35Q96QK1 796 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 KLF15Q9UIH9 416 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 CHMP2BQ9UQN3 213 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 TMEM98Q9Y2Y6 226 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 TEX264Q9Y6I9 313 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 SLC30A1Q9Y6M5 507 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 OTOGLQ3ZCN5 2332 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ZNF106Q9H2Y7 1883 aaKnown RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 ZCWPW2A0A1B0GU75 182 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 LRP3O75074 770 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 MTX2O75431 263 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 VAPBO95292 243 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 GOT2P00505 430 aaKnown RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 SYPP08247 313 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 PGAM1P18669 254 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ITGALP20701 1170 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 ECHS1P30084 290 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 EIF2B5Q13144 721 aaKnown RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 PTK2BQ14289 1009 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 HLTFQ14527 1009 aaKnown RBP eCLIP12.78□□□□□ -0.36
APTX-201ENST00000309615 HLA-BQ31612 363 aa12.78□□□□□ -0.36
APTX-201ENST00000309615 KHDC1Q4VXA5 237 aaKnown RBP12.78□□□□□ -0.36
APTX-201ENST00000309615 ZNF542PQ5EBM4 170 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms