RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 NAV2Q8IVL1 2488 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 A0A1W2PQH9 124 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 LRRD1A4D1F6 860 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 CFAP69A5D8W1 941 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 ANKRD34BA5PLL1 514 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 C3orf70A6NLC5 250 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF487B1APH4 448 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 POC1B-GALNT4F8VUJ3 575 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 H7C4K7 107 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 APOC4-APOC2K7ER74 178 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 TRDMT1O14717 391 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MED7O43513 233 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 AHCYL1O43865 530 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MAGEC1O60732 1142 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 SPAG7O75391 227 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 HAUS5O94927 633 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 EGFP01133 1207 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 APOC2P02655 101 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MT-ND3P03897 115 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PROS1P07225 676 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 FESP07332 822 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MCF2P10911 925 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 NEFHP12036 1026 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 ARSAP15289 507 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 HMGA1P17096 107 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 KRT4P19013 534 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 CD58P19256 250 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 GABRR2P28476 465 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 LRPAP1P30533 357 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MAGEA6P43360 314 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 VPS41P49754 854 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 CLCN2P51788 898 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 NEK3P51956 506 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 KPNA1P52294 538 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 RAP1GDS1P52306 607 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 RAD23BP54727 409 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 GPX6P59796 221 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 CDK16Q00536 496 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PPARDQ03181 441 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 KLC1Q07866 573 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PDIA2Q13087 525 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 GPR17Q13304 367 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 COL9A2Q14055 689 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 TFDP2Q14188 446 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 LRRC32Q14392 662 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 SLC1A5Q15758 541 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 GSTA3Q16772 222 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 WDR72Q3MJ13 1102 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PLK5Q496M5 336 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 TMEM196Q5HYL7 178 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 DGKKQ5KSL6 1271 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 GPR158Q5T848 1215 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 LGSNQ5TDP6 509 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 TRIM68Q6AZZ1 485 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 TRMT10BQ6PF06 316 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 DCUN1D2Q6PH85 259 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 TMEM270Q6UE05 265 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 C4orf50Q6ZRC1 276 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 CYS1Q717R9 158 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 LRRTM3Q86VH5 581 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 RALGPS2Q86X27 583 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 ZBED8Q8IZ13 594 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 KIF2BQ8N4N8 673 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 CSGALNACT1Q8TDX6 532 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 DCAKDQ8WVC6 231 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 SLC44A1Q8WWI5 657 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 DNAJC9Q8WXX5 260 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 CPT1BQ92523 772 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PSMG2Q969U7 264 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 LRRC39Q96DD0 335 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PTCD3Q96EY7 689 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 APOPT1Q96IL0 206 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 NSL1Q96IY1 281 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 ZC3H10Q96K80 434 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 C7orf26Q96N11 449 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PAIP2Q9BPZ3 127 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PI4K2AQ9BTU6 479 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MAK16Q9BXY0 300 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MRPL4Q9BYD3 311 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MIS12Q9H081 205 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 VCXQ9H320 206 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 SYNCQ9H7C4 482 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MANSC1Q9H8J5 431 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 APOBEC3GQ9HC16 384 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MLXIPLQ9NP71 852 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 GKN1Q9NS71 199 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 SPATS2LQ9NUQ6 558 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 SLC38A7Q9NVC3 462 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 DNAJC17Q9NVM6 304 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 RBAKQ9NYW8 714 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 STX18Q9P2W9 335 aaKnown RBP4.95□□□□□ -1.62
CKS1B-201ENST00000308987 ZNF212Q9UDV6 495 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 HAO1Q9UJM8 370 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 LRCH1Q9Y2L9 728 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 NUB1Q9Y5A7 615 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 MAST4O15021 2626 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PTPRQQ9UMZ3 2332 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 DOCK9Q9BZ29 2069 aa4.95□□□□□ -1.62
CKS1B-201ENST00000308987 PCSK5Q92824 1860 aa4.94□□□□□ -1.62
CKS1B-201ENST00000308987 MYLKQ15746 1914 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms