RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 FIS1Q9Y3D6 152 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 A0A1B0GTL3 188 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 A8MX80 341 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TRIM24O15164 1050 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SUPT7LO94864 414 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SORBS2O94875 1100 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 SNUPNO95149 360 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 CLDN7O95471 211 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TPBGLP0DKB5 382 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 PTPN2P17706 415 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 GNAZP19086 355 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 ADARP55265 1226 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 RPL26P61254 145 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 CACNG1Q06432 222 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TSNQ15631 228 aaKnown RBP6.51□□□□□ -1.37
USP47-201ENST00000305481 PFKFB4Q16877 469 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 PRSS36Q5K4E3 855 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 CLEC6AQ6EIG7 209 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 FAM151BQ6UXP7 276 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TAS2R42Q7RTR8 314 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TSPAN33Q86UF1 283 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SCUBE1Q8IWY4 988 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 PELI3Q8N2H9 469 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 OR2AP1Q8NGE2 309 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 EEF1AKMT1Q8WVE0 214 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 CMTM5Q96DZ9 223 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 CATSPER2Q96P56 530 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 ZFYVE1Q9HBF4 777 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SYTL2Q9HCH5 934 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 TDP1Q9NUW8 608 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 SLCO3A1Q9UIG8 710 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 PKP3Q9Y446 797 aa6.51□□□□□ -1.37
USP47-201ENST00000305481 UNC80Q8N2C7 3258 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 XIRP2A4UGR9 3374 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 SCN8AQ9UQD0 1980 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 C1orf232A0A0U1RR37 186 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 NPIPB15A6NHN6 443 aaPredicted RBP6.5□□□□□ -1.37
USP47-201ENST00000305481 NEDD8-MDP1E9PL57 170 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 F8W8V4 182 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 KERAO60938 352 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 SOCS5O75159 536 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 SKAP2O75563 359 aaPredicted RBP6.5□□□□□ -1.37
USP47-201ENST00000305481 ANP32DO95626 131 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CYBBP04839 570 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 BPIP17213 487 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 SYN1P17600 705 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ITGAXP20702 1163 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CD9P21926 228 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PIK3R1P27986 724 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PRDX6P30041 224 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PTGER3P43115 390 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CLCN7P51798 805 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PPP1R3AQ16821 1122 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 MYLK3Q32MK0 819 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 DNAL1Q4LDG9 190 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 FBXO48Q5FWF7 155 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ZNF697Q5TEC3 545 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 TMEM215Q68D42 235 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ACAD11Q709F0 780 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 MICAL1Q8TDZ2 1067 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 FAM161BQ96MY7 647 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PANX3Q96QZ0 392 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CCDC68Q9H2F9 335 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ATP13A3Q9H7F0 1226 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 MEAF6Q9HAF1 191 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 EBF2Q9HAK2 575 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 EML4Q9HC35 981 aaKnown RBP6.5□□□□□ -1.37
USP47-201ENST00000305481 HECAQ9UBI9 543 aaPredicted RBP6.5□□□□□ -1.37
USP47-201ENST00000305481 TRAF6Q9Y4K3 522 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 COPG1Q9Y678 874 aaKnown RBP6.5□□□□□ -1.37
USP47-201ENST00000305481 NPEPPSL1A6NEC2 478 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CAPN8A6NHC0 703 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 H0Y3Z8 333 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PER2O15055 1255 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CLASP2O75122 1294 aaKnown RBP6.5□□□□□ -1.37
USP47-201ENST00000305481 SMIM24O75264 130 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ECI2O75521 394 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CDK14O94921 469 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PRAMEF1O95521 474 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 IGSF6O95976 241 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PPARGP37231 505 aaPredicted RBP6.5□□□□□ -1.37
USP47-201ENST00000305481 HK3P52790 923 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 FOXA1P55317 472 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 MXRA7P84157 204 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 RAD51Q06609 339 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ZNF77Q15935 545 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 NXNQ6DKJ4 435 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PGM2L1Q6PCE3 622 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 CHSY3Q70JA7 882 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ADIPOR2Q86V24 386 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ADGRG2Q8IZP9 1017 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 HMGCLL1Q8TB92 370 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 STAG3L4Q8TBR4 150 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 PHOSPHO2Q8TCD6 241 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 KCNJ9Q92806 393 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 IRF7Q92985 503 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 ECHDC3Q96DC8 303 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 LRRC3BQ96PB8 259 aa6.5□□□□□ -1.37
USP47-201ENST00000305481 LBHD1Q9BQE6 289 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms