RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FAM72AQ5TYM5 149 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 FAM72DQ6L9T8 149 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 PRR23BQ6ZRT6 265 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 FAM72BQ86X60 149 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 GATAD2AQ86YP4 633 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MINDY2Q8NBR6 621 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 SH3YL1Q96HL8 342 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ADGRE2Q9UHX3 823 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 CDH9Q9ULB4 789 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 BDNFP23560 247 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 DIO3P55073 304 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 CXCL9Q07325 125 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 KRR1Q13601 381 aaKnown RBP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 TARBP2Q15633 366 aaKnown RBP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 ARMC8Q8IUR7 673 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 DCP1BQ8IZD4 617 aaKnown RBP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 TRIM54Q9BYV2 358 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 POLD2P49005 469 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 WNT3AP56704 352 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 RAD51Q06609 339 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 LAPTM5Q13571 262 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 DCAF4L1Q3SXM0 396 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 SPANXN2Q5MJ10 180 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 ANKRD13BQ86YJ7 626 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 ADGRG5Q8IZF4 528 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 METTL6Q8TCB7 284 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 PPP1R2P1Q96PQ5 205 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 MIR1-1HGQ9H1L0 117 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 MUC13Q9H3R2 512 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 TNRC6CQ9HCJ0 1690 aaKnown RBP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 RECQL4O94761 1208 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 SLC2A3P11169 496 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 SLC2A4P14672 509 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 ZNF37AP17032 561 aaPredicted RBP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 CAPN3P20807 821 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 KCNA5P22460 613 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 ALDH3A2P51648 485 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 NRG1Q02297 640 aaPredicted RBP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 PAFAH1B3Q15102 231 aaKnown RBP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 CLIP4Q8N3C7 705 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 OR2T12Q8NG77 320 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 FAM120BQ96EK7 910 aaKnown RBP12.98□□□□□ -0.33
TRIM35-201ENST00000305364 CMTM6Q9NX76 183 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 HACL1Q9UJ83 578 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 CDH7Q9ULB5 785 aa12.98□□□□□ -0.33
TRIM35-201ENST00000305364 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-201ENST00000305364 CYBBP04839 570 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 FAM163BP0C2L3 166 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ZNF286BP0CG31 522 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 GRIK1P39086 918 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 PNPLA4P41247 253 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 SLC26A2P50443 739 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 NOMO2Q5JPE7 1267 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ZNF484Q5JVG2 852 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 NOTUMQ6P988 496 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 TFAP2DQ7Z6R9 452 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 RETREG3Q86VR2 466 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 SCN4BQ8IWT1 228 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 MUC3BQ9H195 1237 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 GOLGA2P5Q9HBQ8 144 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 RASSF1Q9NS23 344 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 SATB2Q9UPW6 733 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 GMPPBQ9Y5P6 360 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 CCDC162PA2VCL2 907 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 BTN3A1O00481 513 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 DYNC1LI2O43237 492 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ARHGEF9O43307 516 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 XPNPEP2O43895 674 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 PRKACGP22612 351 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 SLC6A2P23975 617 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 FMO3P31513 532 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ICAM3P32942 547 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 CLCQ05315 142 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 GJC2Q5T442 439 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-201ENST00000305364 LCN8Q6JVE9 175 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 IL27RAQ6UWB1 636 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 GCNT7Q6ZNI0 430 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 HFE2Q6ZVN8 426 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 SCML4Q8N228 414 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ZFP90Q8TF47 636 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ESAMQ96AP7 390 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 GPR20Q99678 358 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 KIFC1Q9BW19 673 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 SYTL2Q9HCH5 934 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ITM2CQ9NQX7 267 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 POLG2Q9UHN1 485 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 POU2F3Q9UKI9 436 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ERVK-11Q9UQG0 969 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 INVSQ9Y283 1065 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 BCKDKO14874 412 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 SLC22A1O15245 554 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 PPM1FP49593 454 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-201ENST00000305364 DNAJB13P59910 316 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 BTG3Q14201 252 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ZNF235Q14590 738 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 SPCS2Q15005 226 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 COLEC12Q5KU26 742 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 C6orf141Q5SZD1 244 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 FAM117BQ6P1L5 589 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms