RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CTSKP43235 329 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 ARSDP51689 593 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 PRAMEP78395 509 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 PEX6Q13608 980 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 SF3A2Q15428 464 aaKnown RBP24.3■■□□□ 1.48
HOXC9-201ENST00000303450 MSS51Q4VC12 460 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 TPRG1LQ5T0D9 272 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 IL27RAQ6UWB1 636 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 MACC1Q6ZN28 852 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 AGGF1Q8N302 714 aaeCLIP24.3■■□□□ 1.48
HOXC9-201ENST00000303450 GLYATL1Q969I3 302 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 HDAC10Q969S8 669 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 STAMBPL1Q96FJ0 436 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 RHOXF2Q9BQY4 288 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 ASB8Q9H765 288 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 PARD6AQ9NPB6 346 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 CNOT6Q9ULM6 557 aaKnown RBP24.3■■□□□ 1.48
HOXC9-201ENST00000303450 WDR87Q6ZQQ6 2873 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 ADAMTS9Q9P2N4 1935 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A9O60656 530 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 BANF1O75531 89 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 SLC25A14O95258 325 aaPredicted RBP24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A6P19224 532 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 ITGALP20701 1170 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A1P22309 533 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A4P22310 534 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A3P35503 534 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A5P35504 534 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 ACVR1Q04771 509 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 TEX35Q5T0J7 233 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 ENPP7Q6UWV6 458 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 CES3Q6UWW8 571 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 OR6P1Q8NGX9 317 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 FBXO25Q8TCJ0 367 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 BTN2A2Q8WVV5 523 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 MFSD3Q96ES6 412 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 WDR92Q96MX6 357 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 VPS35Q96QK1 796 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A7Q9HAW7 530 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A10Q9HAW8 530 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 UGT1A8Q9HAW9 530 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 TREX1Q9NSU2 369 aa24.3■■□□□ 1.48
HOXC9-201ENST00000303450 TP53BP1Q12888 1972 aaPredicted RBP24.29■■□□□ 1.48
HOXC9-201ENST00000303450 RIF1Q5UIP0 2472 aaKnown RBP24.29■■□□□ 1.48
HOXC9-201ENST00000303450 FAM237BA0A1B0GVD1 139 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 SLU7O95391 586 aaKnown RBP24.29■■□□□ 1.48
HOXC9-201ENST00000303450 ENGP17813 658 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 ATXN3P54252 364 aaPredicted RBP24.29■■□□□ 1.48
HOXC9-201ENST00000303450 NFATC2Q13469 925 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 FZD2Q14332 565 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 ZRANB3Q5FWF4 1079 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 ZDHHC24Q6UX98 284 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 CENPUQ71F23 418 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 SNX20Q7Z614 316 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 TRIM74Q86UV6 250 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 PARGQ86W56 976 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 PHYKPLQ8IUZ5 450 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 GDAP1Q8TB36 358 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 IFT81Q8WYA0 676 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 COX14Q96I36 57 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 GTPBP2Q9BX10 602 aaKnown RBP24.29■■□□□ 1.48
HOXC9-201ENST00000303450 RPS6KL1Q9Y6S9 549 aa24.29■■□□□ 1.48
HOXC9-201ENST00000303450 LNP1A1A4G5 178 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 CCDC162PA2VCL2 907 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 TMEM202A6NGA9 273 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 BHMG1C9JSJ3 638 aaPredicted RBP24.28■■□□□ 1.48
HOXC9-201ENST00000303450 GPR39O43194 453 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 GFRA3O60609 400 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 PDIA2Q13087 525 aaKnown RBP24.28■■□□□ 1.48
HOXC9-201ENST00000303450 HP1BP3Q5SSJ5 553 aaPredicted RBP24.28■■□□□ 1.48
HOXC9-201ENST00000303450 AFTPHQ6ULP2 937 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 OR56A4Q8NGH8 313 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 ZNF669Q96BR6 464 aaPredicted RBP24.28■■□□□ 1.48
HOXC9-201ENST00000303450 LRRC39Q96DD0 335 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 EBNA1BP2Q99848 306 aaKnown RBP24.28■■□□□ 1.48
HOXC9-201ENST00000303450 NAT9Q9BTE0 207 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 FAM96AQ9H5X1 160 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 ERVMER34-1Q9H9K5 563 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 CRLS1Q9UJA2 301 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 PCDH15Q96QU1 1955 aa24.28■■□□□ 1.48
HOXC9-201ENST00000303450 FOXD2O60548 495 aaPredicted RBP24.27■■□□□ 1.48
HOXC9-201ENST00000303450 ASMTLO95671 621 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 PAMP19021 973 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 TGM1P22735 817 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 ELK3P41970 407 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 CACNG1Q06432 222 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 HLA-BQ31612 363 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 ANKRD20A4Q4UJ75 823 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 PRAMEF14Q5SWL7 426 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 DOK6Q6PKX4 331 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 PRR23CQ6ZRP0 262 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 TMEM135Q86UB9 458 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 IFT20Q8IY31 132 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 TRIM56Q9BRZ2 755 aaKnown RBP24.27■■□□□ 1.48
HOXC9-201ENST00000303450 SMOXQ9NWM0 555 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 DNAJC28Q9NX36 388 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 KLQ9UEF7 1012 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 TMPRSS11EQ9UL52 423 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 TMEM98Q9Y2Y6 226 aa24.27■■□□□ 1.48
HOXC9-201ENST00000303450 OR51F1A6NGY5 319 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms