RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PRMT5O14744 637 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 OR1I1O60431 355 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 ZNF37AP17032 561 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 LTBRP36941 435 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 GRIA2P42262 883 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 SKIV2L2P42285 1042 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 SEMG2Q02383 582 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 ZNF234Q14588 700 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 UGT3A1Q6NUS8 523 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 CCDC121Q6ZUS5 278 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 SERPINA9Q86WD7 417 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 RBFAQ8N0V3 343 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 TMIEQ8NEW7 156 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 ANKRD49Q8WVL7 239 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 KCNJ9Q92806 393 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 CCDC126Q96EE4 140 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 FAM50BQ9Y247 325 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 COL4A3Q01955 1670 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 DENND4AQ7Z401 1863 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 TRBV5-4A0A0C4DH59 114 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 CCT8L1PA6NM43 557 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 E5RI56 91 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 KAT7O95251 611 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 SBK3P0C264 359 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 TIMP2P16035 220 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 ABCE1P61221 599 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 TIAL1Q01085 375 aaKnown RBP eCLIP15.61■□□□□ 0.091e-6■■■■■ 34.1
HERPUD1-201ENST00000300302 ELAVL3Q14576 367 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 E2F5Q15329 346 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 CHRNA6Q15825 494 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 TECRLQ5HYJ1 363 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 C9orf64Q5T6V5 341 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 CES4AQ5XG92 561 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 ERAP2Q6P179 960 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 TMEM207Q6UWW9 146 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 TRPM8Q7Z2W7 1104 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 GPR26Q8NDV2 337 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 SUSD6Q92537 303 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 CLPBQ9H078 707 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 P2RY12Q9H244 342 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 TMEM245Q9H330 911 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 PCDH12Q9NPG4 1184 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 RAD18Q9NS91 495 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 EPS15L1Q9UBC2 864 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 OAS3Q9Y6K5 1087 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 C16orf96A6NNT2 1141 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 KPNA3O00505 521 aaPredicted RBP15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 GPR39O43194 453 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 APODP05090 189 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 TFEBP19484 476 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 RPS3P23396 243 aaKnown RBP eCLIP15.61■□□□□ 0.095e-7■■□□□ 12.5
HERPUD1-201ENST00000300302 ATP5F1P24539 256 aaPredicted RBP15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 ACRV1P26436 265 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 SPINT3P49223 89 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 LRRC73Q5JTD7 316 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 DSG4Q86SJ6 1040 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 NKAPQ8N5F7 415 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 SMRP1Q8NCR6 262 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 OR6Y1Q8NGX8 325 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 C10orf82Q8WW14 230 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 UNKQ9C0B0 810 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 TRMT6Q9UJA5 497 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 GNPTGQ9UJJ9 305 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 DCTN4Q9UJW0 460 aa15.61■□□□□ 0.09
HERPUD1-201ENST00000300302 XIRP2A4UGR9 3374 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 MUC22E2RYF6 1773 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 A0A0G2JND7 137 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 AGAP14A8MT82 685 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 F8W8V4 182 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 H3BMM5 538 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 DCTN3O75935 186 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 C1SP09871 688 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 HLA-EP13747 358 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 CD1DP15813 335 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 POU3F3P20264 500 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 CHRM3P20309 590 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 COL19A1Q14993 1142 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 CTSL3PQ5NE16 218 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 PTRHD1Q6GMV3 140 aaKnown RBP15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 WDR75Q8IWA0 830 aaKnown RBP15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 NXPE1Q8N323 547 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 GBP7Q8N8V2 638 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 PIWIL2Q8TC59 973 aaKnown RBP15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 FAM136AQ96C01 138 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 ULK4Q96C45 1275 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 PPP1R16AQ96I34 528 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 GPR21Q99679 349 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 SIKE1Q9BRV8 207 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 C20orf27Q9GZN8 174 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 CDH19Q9H159 772 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 KDM4CQ9H3R0 1056 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 THAP10Q9P2Z0 257 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 SUN2Q9UH99 717 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 MED16Q9Y2X0 877 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 NUMBLQ9Y6R0 609 aa15.6■□□□□ 0.09
HERPUD1-201ENST00000300302 ARNTLO00327 626 aa15.59■□□□□ 0.09
HERPUD1-201ENST00000300302 ITM2AO43736 263 aa15.59■□□□□ 0.09
HERPUD1-201ENST00000300302 DLX3O60479 287 aa15.59■□□□□ 0.09
HERPUD1-201ENST00000300302 UGT1A6P19224 532 aa15.59■□□□□ 0.09
HERPUD1-201ENST00000300302 UGT1A1P22309 533 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms