RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 PTCRAQ6ISU1 281 aaPredicted RBP18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 ERN2Q76MJ5 926 aaKnown RBP18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 TBC1D1Q86TI0 1168 aaPredicted RBP18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 CENPLQ8N0S6 344 aaPredicted RBP18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 LRRC8CQ8TDW0 803 aa18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 KCTD4Q8WVF5 259 aa18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 BIRC8Q96P09 236 aa18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 FAM107BQ9H098 131 aa18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 CD84Q9UIB8 345 aa18.4■□□□□ 0.54
SEC61A2-201ENST00000298428 SPINT1O43278 529 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 RNASEH1O60930 286 aaKnown RBP18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 PROCP04070 461 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 TAC1P20366 129 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 ACRV1P26436 265 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 NTSR1P30989 418 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 CA5AP35218 305 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 SUOXP51687 545 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 ADARP55265 1226 aaKnown RBP18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 IER5LQ5T953 404 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 LYPLAL1Q5VWZ2 237 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 SDE2Q6IQ49 451 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 LIPIQ6XZB0 460 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 PIM3Q86V86 326 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 BCAS4Q8TDM0 211 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 KCNV2Q8TDN2 545 aa18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 RSPH9Q9H1X1 276 aaPredicted RBP18.39■□□□□ 0.54
SEC61A2-201ENST00000298428 F5P12259 2224 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 CKAP5Q14008 2032 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 RHOBTB1O94844 696 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 KLHL2O95198 593 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 PKMP14618 531 aaKnown RBP18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 ETV3P41162 512 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 DCDC1P59894 354 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 SATB1Q01826 763 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 ITGA9Q13797 1035 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 Q6ZVL8 140 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 CCDC91Q7Z6B0 441 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 CACUL1Q86Y37 369 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 LRRC34Q8IZ02 419 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 NXPE1Q8N323 547 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 WRAP53Q9BUR4 548 aaKnown RBP18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 MECRQ9BV79 373 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 HDAC8Q9BY41 377 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 FAM83DQ9H4H8 585 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 NMRAL1Q9HBL8 299 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 POPDC3Q9HBV1 291 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 RAD18Q9NS91 495 aa18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 RUVBL2Q9Y230 463 aaKnown RBP18.39■□□□□ 0.53
SEC61A2-201ENST00000298428 AGAP14A8MT82 685 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 H0Y858 1186 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 PSMD11O00231 422 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 PRMT5O14744 637 aaPredicted RBP18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 AREL1O15033 823 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 FAM107AO95990 144 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 ESR1P03372 595 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 NEFHP12036 1026 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 GLULP15104 373 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 ZNF7P17097 686 aaPredicted RBP18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 P2RY2P41231 377 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 TIAL1Q01085 375 aaKnown RBP eCLIP18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 CST6Q15828 149 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 TSNAXIP1Q2TAA8 658 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 ATP13A5Q4VNC0 1218 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 CTSL3PQ5NE16 218 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 RGS9BPQ6ZS82 235 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 RBFAQ8N0V3 343 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 SPATA6LQ8N4H0 392 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 IL17RCQ8NAC3 791 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 ZNF75CPQ92670 426 aaPredicted RBP18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 NXNL1Q96CM4 212 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 CCT8L2Q96SF2 557 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 GABRG3Q99928 467 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 SPATA16Q9BXB7 569 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 P2RY12Q9H244 342 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 TAS2R13Q9NYV9 303 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 COMMD10Q9Y6G5 202 aa18.38■□□□□ 0.53
SEC61A2-201ENST00000298428 RGSL1A5PLK6 1076 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 NEMP1O14524 444 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 WISP3O95389 354 aaPredicted RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 ADH1BP00325 375 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 BPGMP07738 259 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 GLRBP48167 497 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 LIG3P49916 1009 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 CNTN1Q12860 1018 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 DLG1Q12959 904 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 PDAP1Q13442 181 aaKnown RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 CSHL1Q14406 222 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 STARD3Q14849 445 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 ACOX1Q15067 660 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 TRMT11Q7Z4G4 463 aaKnown RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 SCAMP4Q969E2 229 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 FAM136AQ96C01 138 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 BOCQ9BWV1 1114 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 CLPBQ9H078 707 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 CDH19Q9H159 772 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 NFKBIL1Q9UBC1 381 aaPredicted RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 FAM50BQ9Y247 325 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 MED16Q9Y2X0 877 aa18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 MTF2Q9Y483 593 aaPredicted RBP18.37■□□□□ 0.53
SEC61A2-201ENST00000298428 PCDHB1Q9Y5F3 818 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms