RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MED16Q9Y2X0 877 aa15.47■□□□□ 0.07
LSM6-201ENST00000296581 UBA6A0AVT1 1052 aaPredicted RBP15.46■□□□□ 0.07
LSM6-201ENST00000296581 LEFTY1O75610 366 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 CTSLP07711 333 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 CCDC166P0CW27 439 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 LAMP2P13473 410 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 LHCGRP22888 699 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 FMO4P31512 558 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 PTGER3P43115 390 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 MAGEA8P43361 318 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 PRKAA2P54646 552 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 DLX2Q07687 328 aaPredicted RBP15.46■□□□□ 0.07
LSM6-201ENST00000296581 ITGA9Q13797 1035 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 TECRLQ5HYJ1 363 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 LRRC66Q68CR7 880 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 STK40Q8N2I9 435 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 SPATA6LQ8N4H0 392 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 HCAR2Q8TDS4 363 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.46■□□□□ 0.07
LSM6-201ENST00000296581 RIPOR3Q96MK2 946 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 MTG2Q9H4K7 406 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 ZNF395Q9H8N7 513 aaPredicted RBP15.46■□□□□ 0.07
LSM6-201ENST00000296581 IL36AQ9UHA7 158 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 PLA2G4CQ9UP65 541 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 FNDC3AQ9Y2H6 1198 aaKnown RBP15.46■□□□□ 0.07
LSM6-201ENST00000296581 USH1CQ9Y6N9 552 aa15.46■□□□□ 0.07
LSM6-201ENST00000296581 TRBV5-4A0A0C4DH59 114 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 TRIM13O60858 407 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 H2AFYO75367 372 aaKnown RBP15.46■□□□□ 0.06
LSM6-201ENST00000296581 PRAMEF1O95521 474 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 LINGO3P0C6S8 592 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 PSMC3P17980 439 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 SPAM1P38567 509 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 OPRD1P41143 372 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 ELF3P78545 371 aaPredicted RBP15.46■□□□□ 0.06
LSM6-201ENST00000296581 KDSRQ06136 332 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 GRM2Q14416 872 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 ACAP2Q15057 778 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 ARSIQ5FYB1 569 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 FAM151BQ6UXP7 276 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 TRPM8Q7Z2W7 1104 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 SNX20Q7Z614 316 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 YAF2Q8IY57 180 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 TERB1Q8NA31 727 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 B4GALNT2Q8NHY0 566 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 SREK1Q8WXA9 508 aaKnown RBP15.46■□□□□ 0.06
LSM6-201ENST00000296581 RMDN2Q96LZ7 410 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 ZNF570Q96NI8 536 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 CCDC68Q9H2F9 335 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 DKK3Q9UBP4 350 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 B4GALT6Q9UBX8 382 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 COMMD10Q9Y6G5 202 aa15.46■□□□□ 0.06
LSM6-201ENST00000296581 ITM2AO43736 263 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 DNAJC8O75937 253 aaPredicted RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 PKMP14618 531 aaKnown RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 ZNF37AP17032 561 aaPredicted RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 GJA4P35212 333 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 SLC1A6P48664 564 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 ROR2Q01974 943 aaKnown RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 PTSQ03393 145 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 SETMARQ53H47 684 aaPredicted RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 LACTB2Q53H82 288 aaPredicted RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 CTSL3PQ5NE16 218 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 KLC3Q6P597 504 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 TAS2R42Q7RTR8 314 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 CRLF3Q8IUI8 442 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 SPNS2Q8IVW8 549 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 RFWD2Q8NHY2 731 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 KXD1Q9BQD3 176 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 P2RY12Q9H244 342 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 PRO3102Q9H379 93 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 TAS2R13Q9NYV9 303 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 BAIAP2L1Q9UHR4 511 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 GLYATL1P3A0A0U1RQE8 302 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 A8MX80 341 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 TMEM114B3SHH9 223 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 GPR39O43194 453 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 OR1I1O60431 355 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 RHOBTB1O94844 696 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 ANP32DO95626 131 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 RBP1P09455 135 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 IMPDH2P12268 514 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 ITGALP20701 1170 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 MTHFRP42898 656 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 ABCE1P61221 599 aaKnown RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 NFATC2Q13469 925 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 ZNF805Q5CZA5 627 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 LIPMQ5VYY2 423 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 PARM1Q6UWI2 310 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 SORT1Q99523 831 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 KDM4CQ9H3R0 1056 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 KCNK13Q9HB14 408 aa15.45■□□□□ 0.06
LSM6-201ENST00000296581 MTF2Q9Y483 593 aaPredicted RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 OAS3Q9Y6K5 1087 aaKnown RBP15.45■□□□□ 0.06
LSM6-201ENST00000296581 AGAP14A8MT82 685 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 DLX3O60479 287 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 ECI2O75521 394 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 ESR1P03372 595 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 C1SP09871 688 aa15.44■□□□□ 0.06
LSM6-201ENST00000296581 CYP2A6P11509 494 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms