RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 KIAA0100Q14667 2235 aaKnown RBP11.71□□□□□ -0.53
RHO-201ENST00000296271 A0A1B0GVM2 712 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 ILVBLA1L0T0 632 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 RNASEH2AO75792 299 aaKnown RBP11.71□□□□□ -0.53
RHO-201ENST00000296271 ABLIM3O94929 683 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 CRTAMO95727 393 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 TSPAN12O95859 305 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 ME2P23368 584 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 ALDH1A3P47895 512 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 SUOXP51687 545 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 TAF1AQ15573 450 aaPredicted RBP11.71□□□□□ -0.53
RHO-201ENST00000296271 KIF19Q2TAC6 998 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 IL23RQ5VWK5 629 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 TPGS1Q6ZTW0 290 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 GALNT7Q86SF2 657 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 PQLC1Q8N2U9 271 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 GALNT4Q8N4A0 578 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 CLDN19Q8N6F1 224 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 SLAIN1Q8ND83 568 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 CCDC126Q96EE4 140 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 ZNF599Q96NL3 588 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 PLEKHG4BQ96PX9 1271 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 FEM1AQ9BSK4 669 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 TNKS2Q9H2K2 1166 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 AFF4Q9UHB7 1163 aaKnown RBP11.71□□□□□ -0.53
RHO-201ENST00000296271 VPS51Q9UID3 782 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 TBC1D30Q9Y2I9 924 aa11.71□□□□□ -0.53
RHO-201ENST00000296271 PLXNA4Q9HCM2 1894 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 COL4A6Q14031 1691 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 NR5A2O00482 541 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 BNIP3LO60238 219 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 GREM1O60565 184 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 ITGB8P26012 769 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 VEGFBP49765 207 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 KPNA1P52294 538 aaPredicted RBP11.71□□□□□ -0.54
RHO-201ENST00000296271 HK2P52789 917 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 MRPS35P82673 323 aaKnown RBP11.71□□□□□ -0.54
RHO-201ENST00000296271 CLCQ05315 142 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 RNF168Q8IYW5 571 aaPredicted RBP11.71□□□□□ -0.54
RHO-201ENST00000296271 HS6ST3Q8IZP7 471 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 TTC30BQ8N4P2 665 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 MRPL1Q9BYD6 325 aaKnown RBP11.71□□□□□ -0.54
RHO-201ENST00000296271 EVLQ9UI08 416 aaPredicted RBP11.71□□□□□ -0.54
RHO-201ENST00000296271 PRPF19Q9UMS4 504 aaKnown RBP11.71□□□□□ -0.54
RHO-201ENST00000296271 REV3LO60673 3130 aa11.71□□□□□ -0.54
RHO-201ENST00000296271 MRASO14807 208 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 AZIN1O14977 448 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 STX7O15400 261 aaKnown RBP11.7□□□□□ -0.54
RHO-201ENST00000296271 HSPA1AP0DMV8 641 aaKnown RBP11.7□□□□□ -0.54
RHO-201ENST00000296271 HSPA1BP0DMV9 641 aaKnown RBP11.7□□□□□ -0.54
RHO-201ENST00000296271 UGT1A6P19224 532 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 OGNP20774 298 aaKnown RBP11.7□□□□□ -0.54
RHO-201ENST00000296271 CAPN3P20807 821 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 LPOP22079 712 aaPredicted RBP11.7□□□□□ -0.54
RHO-201ENST00000296271 UGT1A1P22309 533 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 UGT1A4P22310 534 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 GPX3P22352 226 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 UGT1A3P35503 534 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 UGT1A5P35504 534 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 INHBCP55103 352 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 LRRC73Q5JTD7 316 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 FAM151BQ6UXP7 276 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 SYVN1Q86TM6 617 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 PHYKPLQ8IUZ5 450 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 BBS5Q8N3I7 341 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 FBXO39Q8N4B4 442 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 LKAAEAR1Q8TD35 194 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 GBF1Q92538 1859 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 JADE3Q92613 823 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 TUBGCP3Q96CW5 907 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 C1orf50Q9BV19 199 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 RNF208Q9H0X6 261 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 TAS2R13Q9NYV9 303 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 POLG2Q9UHN1 485 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 EIF2B4Q9UI10 523 aaKnown RBP11.7□□□□□ -0.54
RHO-201ENST00000296271 RIMS3Q9UJD0 308 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 CPQQ9Y646 472 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 C2orf81A6NN90 581 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 SNRPB2P08579 225 aaKnown RBP11.7□□□□□ -0.54
RHO-201ENST00000296271 VCLP18206 1134 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 SLC7A2P52569 658 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 RHOAP61586 193 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 SATB1Q01826 763 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 CREB5Q02930 508 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 SQLEQ14534 574 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 HERC3Q15034 1050 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 NCEH1Q6PIU2 408 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 AFTPHQ6ULP2 937 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 CLYBLQ8N0X4 340 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 OR52B6Q8NGF0 335 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 OR2T11Q8NH01 316 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 CD200R1Q8TD46 325 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 C2orf15Q8WU43 125 aaKnown RBP11.7□□□□□ -0.54
RHO-201ENST00000296271 KIAA1191Q96A73 305 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 VPS33AQ96AX1 596 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 LINGO1Q96FE5 620 aa11.7□□□□□ -0.54
RHO-201ENST00000296271 CCDC68Q9H2F9 335 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms