RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 C5orf67F2Z3F1 127 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 GRM6O15303 877 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 BMP10O95393 424 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 COX7A2P14406 83 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 GUCA1AP43080 201 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 PRKCQQ04759 706 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ATP13A4Q4VNC1 1196 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ARHGAP15Q53QZ3 475 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 EGFLAMQ63HQ2 1017 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 UNC93AQ86WB7 457 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 IRF2BP1Q8IU81 584 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 IZUMO1Q8IYV9 350 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 LRRC15Q8TF66 581 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC44A1Q8WWI5 657 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 MRPS31Q92665 395 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 HSFY1Q96LI6 401 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 PWWP2AQ96N64 755 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 CWH43Q9H720 699 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 LRRC4CQ9HCJ2 640 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SSU72Q9NP77 194 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SNX15Q9NRS6 342 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 CATSPERZQ9NTU4 200 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC25A13Q9UJS0 675 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 PLLPQ9Y342 182 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 A8MUI8 341 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 FGF10O15520 208 aaPredicted RBP11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 AVILO75366 819 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 OR56A5P0C7T3 313 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ITGAXP20702 1163 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 ALDH9A1P49189 494 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SMIM11AP58511 58 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 PTSQ03393 145 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 DSC1Q08554 894 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 STARD3Q14849 445 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 STXBP5Q5T5C0 1151 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 TPGS2Q68CL5 300 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 PACS1Q6VY07 963 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC41A1Q8IVJ1 513 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 DENND6AQ8IWF6 608 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC2A14Q8TDB8 520 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 HPS1Q92902 700 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 VPS35Q96QK1 796 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 FIZ1Q96SL8 496 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 XPR1Q9UBH6 696 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 KLQ9UEF7 1012 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 CIDEBQ9UHD4 219 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 GMEB1Q9Y692 573 aa11.81□□□□□ -0.52
SYNGAP1-201ENST00000293748 CEP290O15078 2479 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 SAGE2PA6NJ88 616 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 NRP2O60462 931 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 HPGDP15428 266 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 DGKAP23743 735 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 CARNMT1Q8N4J0 409 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 EFCAB3Q8N7B9 438 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 SELENOMQ8WWX9 145 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 SNRNP25Q9BV90 132 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 POLR1EQ9GZS1 481 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 GOLGA2P5Q9HBQ8 144 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 LGALS13Q9UHV8 139 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 CRYL1Q9Y2S2 319 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 MEIS3P2A8K0S8 358 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 MBL2P11226 248 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 OR1E1P30953 314 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 OR1D2P34982 312 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 RCVRNP35243 200 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 MTHFRP42898 656 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 TCTN1Q2MV58 587 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 Q7L0L9 218 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 KRT77Q7Z794 578 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLCO6A1Q86UG4 719 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 C10orf107Q8IVU9 208 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 KCTD4Q8WVF5 259 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 REXO5Q96IC2 774 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZCCHC2Q9C0B9 1178 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 ATP13A1Q9HD20 1204 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 TLR8Q9NR97 1041 aaKnown RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 MIOSQ9NXC5 875 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 PCDH10Q9P2E7 1040 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 CORO2BQ9UQ03 480 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 RNF225M0QZC1 329 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 PTGESO14684 152 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 AZIN1O14977 448 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 ZNF37AP17032 561 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 FMO4P31512 558 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 CRHR1P34998 444 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 POLD2P49005 469 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 C15orf59Q2T9L4 293 aaPredicted RBP11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 SLC39A4Q6P5W5 647 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 NPNTQ6UXI9 565 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 TFAP2DQ7Z6R9 452 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 LRRC49Q8IUZ0 686 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 MOSPD2Q8NHP6 518 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 NECTIN4Q96NY8 510 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 STRA6Q9BX79 667 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 MUC13Q9H3R2 512 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 ACP6Q9NPH0 428 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 PRKAG3Q9UGI9 489 aa11.8□□□□□ -0.52
SYNGAP1-201ENST00000293748 MAFFQ9ULX9 164 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms