RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 THOP1P52888 689 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 HMGCS1Q01581 520 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 HIST2H2ACQ16777 129 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 UAP1L1Q3KQV9 507 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TJAP1Q5JTD0 557 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 HIST2H2AA3Q6FI13 130 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TRNP1Q6NT89 227 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ZCCHC8Q6NZY4 707 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 RTL3Q8N8U3 475 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 ACMSDQ8TDX5 336 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 MYO19Q96H55 970 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 C6orf62Q9GZU0 229 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 ATP13A3Q9H7F0 1226 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 BRD9Q9H8M2 597 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CACNA2D2Q9NY47 1150 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 DHRS12A0PJE2 317 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 H3BN98 237 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CDC7O00311 574 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 IRAK2O43187 625 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 GPR39O43194 453 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 RGS14O43566 566 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TLL1O43897 1013 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ULK1O75385 1050 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ALDOAP04075 364 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 MLNP12872 115 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CYP2A7P20853 494 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 MAT2AP31153 395 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 USP46P62068 366 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 DYNC1I2Q13409 638 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 LAPTM4AQ15012 233 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 BRMS1LQ5PSV4 323 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TSTD2Q5T7W7 516 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 DEPDC1Q5TB30 811 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 FAM219BQ5XKK7 198 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CGB2Q6NT52 195 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 POTEHQ6S545 545 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TMEM26Q6ZUK4 368 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 UBE2R2Q712K3 238 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 GET4Q7L5D6 327 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 TMPRSS11BQ86T26 416 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.76□□□□□ -1.652e-7■■■■■ 278.5
UBR1-201ENST00000290650 VPS37AQ8NEZ2 397 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 MYLIPQ8WY64 445 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 KHSRPQ92945 711 aaKnown RBP eCLIP4.76□□□□□ -1.658e-7■■■■□ 24
UBR1-201ENST00000290650 SIGLEC10Q96LC7 697 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 APOLD1Q96LR9 279 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 MTERF1Q99551 399 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 PTPN18Q99952 460 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ADAMTS10Q9H324 1103 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CHCHD3Q9NX63 227 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 GNEQ9Y223 722 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 POMPQ9Y244 141 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 MRPS23Q9Y3D9 190 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 MTF2Q9Y483 593 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 RAD54BQ9Y620 910 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TMEM88BA6NKF7 163 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 RFPL1O75677 317 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CABYRO75952 493 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CST1P01037 141 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 KRT6AP02538 564 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 KRT6BP04259 564 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 KRT6CP48668 564 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 DGKQP52824 942 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ELAVL2Q12926 359 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 LAPTM5Q13571 262 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 AGMOQ6ZNB7 445 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CEP97Q8IW35 865 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 MCOLN3Q8TDD5 553 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 KBTBD7Q8WVZ9 684 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TRIB2Q92519 343 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 RMND5AQ9H871 391 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 GNPTGQ9UJJ9 305 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TMEM114B3SHH9 223 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TYROBPO43914 113 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 SELPP16109 830 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CKMT2P17540 419 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CCNCP24863 283 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CDH15P55291 814 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 LPIN1Q14693 890 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 CARTPTQ16568 116 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 IL23RQ5VWK5 629 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TMEM214Q6NUQ4 689 aaKnown RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 ERAP2Q6P179 960 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 DRICH1Q6PGQ1 229 aaPredicted RBP4.76□□□□□ -1.65
UBR1-201ENST00000290650 B3GNT9Q6UX72 402 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 SERPINA13PQ6UXR4 307 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 MBOAT1Q6ZNC8 495 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 VN1R5Q7Z5H4 357 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 SERPINA9Q86WD7 417 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TDRPQ86YL5 185 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ZDHHC13Q8IUH4 622 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 PQLC1Q8N2U9 271 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 C3orf58Q8NDZ4 430 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 UROC1Q96N76 676 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 TMEM74Q96NL1 305 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 SCN3BQ9NY72 215 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 PRKAG3Q9UGI9 489 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 ANAPC2Q9UJX6 822 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 OGDHLQ9ULD0 1010 aa4.76□□□□□ -1.65
UBR1-201ENST00000290650 MYRFQ9Y2G1 1151 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms