RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 NAB1Q13506 487 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 DDX39BQ13838 428 aaKnown RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 TMEM53Q6P2H8 277 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 TRPV1Q8NER1 839 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 BTN2A2Q8WVV5 523 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ARMC5Q96C12 935 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 DPY30Q9C005 99 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 AGO3Q9H9G7 860 aaKnown RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ANKRD6Q9Y2G4 727 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CPQQ9Y646 472 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 E7ENX8 843 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 LOC110117498-PIK3R3F6TDL0 507 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 HOXB8P17481 243 aaPredicted RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CRABP2P29373 138 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 HTR7P34969 479 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 SLC16A1P53985 500 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ILF2Q12905 390 aaKnown RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ADGRE1Q14246 886 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ACOX1Q15067 660 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 FNBP1LQ5T0N5 605 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 C11orf88Q6PI97 169 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CCRL2O00421 344 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 FAM155BO75949 473 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 CPSF4O95639 269 aaKnown RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ENTPD1P49961 510 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 GATMP50440 423 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 UNC5AQ6ZN44 842 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 SLC44A2Q8IWA5 706 aaPredicted RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 LPCAT1Q8NF37 534 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 LRTOMTQ8WZ04 291 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 FICDQ9BVA6 458 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 COQ10BQ9H8M1 238 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 MRPL39Q9NYK5 338 aaKnown RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 CCDC59Q9P031 241 aaKnown RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 COG5Q9UP83 839 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 SNTNA6NMZ2 147 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 HAS3O00219 553 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ITGA1P56199 1179 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 PHC1P78364 1004 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 BNIP2Q12982 314 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 PDGFRLQ15198 375 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 LRRC38Q5VT99 294 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ZNF470Q6ECI4 717 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 XKR5Q6UX68 686 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 KCTD8Q6ZWB6 473 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ENDOVQ8N8Q3 282 aaKnown RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ARL14EPQ8N8R7 260 aaPredicted RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 WFIKKN2Q8TEU8 576 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 IRF7Q92985 503 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ATP13A3Q9H7F0 1226 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 DMAC2Q9NW81 257 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 GDAP2Q9NXN4 497 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 FBXO10Q9UK96 956 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 INSL5Q9Y5Q6 135 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 TIAM2Q8IVF5 1701 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 MYBPHLA2RUH7 354 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 TMEM114B3SHH9 223 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 PENKP01210 267 aaPredicted RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 LBPP18428 481 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 GRK3P35626 688 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 OGFOD2Q6N063 350 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 TLDC1Q6P9B6 456 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 EBNA1BP2Q99848 306 aaKnown RBP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 FGFBP2Q9BYJ0 223 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ING3Q9NXR8 418 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 SPASTQ9UBP0 616 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 hCG_1818297A0A087WSY0 165 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 A0A1W2PQ72 361 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 KRT87PA6NCN2 255 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 TSPAN4O14817 238 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ADAMTS3O15072 1205 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 CDH15P55291 814 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ADGRD1Q6QNK2 874 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 RAB43Q86YS6 212 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 DMRTB1Q96MA1 342 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 ING4Q9UNL4 249 aa11.33□□□□□ -0.6
NPC1L1-201ENST00000289547 H0YGN5 161 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 NRP2O60462 931 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 GJB5O95377 273 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ENO2P09104 434 aaPredicted RBP11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 NOMO3P69849 1222 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CYP4F2P78329 520 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CYP4F3Q08477 520 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 CDH17Q12864 832 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 TSNQ15631 228 aaKnown RBP11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 SPRED3Q2MJR0 410 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 ANKS6Q68DC2 871 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 POTEHQ6S545 545 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 GK5Q6ZS86 529 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 BBS12Q6ZW61 710 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 STRADAQ7RTN6 431 aa11.32□□□□□ -0.6
NPC1L1-201ENST00000289547 FAM156AQ8NDB6 213 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms