RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ASTLQ6HA08 431 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-201ENST00000279247 GSTO2Q9H4Y5 243 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 ASB8Q9H765 288 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 ZFYVE1Q9HBF4 777 aa17.85■□□□□ 0.45
CAPN1-201ENST00000279247 FBRSL1Q9HCM7 1045 aaKnown RBP17.85■□□□□ 0.45
CAPN1-201ENST00000279247 DNMT3BQ9UBC3 853 aaKnown RBP17.85■□□□□ 0.45
CAPN1-201ENST00000279247 TPBGLP0DKB5 382 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 HNF1BP35680 557 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 SLC7A9P82251 487 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 RAD51Q06609 339 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 SLC14A2Q15849 920 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 DNAL1Q4LDG9 190 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 UNC50Q53HI1 259 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 ZNF678Q5SXM1 525 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 GRASPQ7Z6J2 395 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-201ENST00000279247 ZNF366Q8N895 744 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 PIH1D2Q8WWB5 315 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 PEX13Q92968 403 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 LINGO1Q96FE5 620 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 MTG2Q9H4K7 406 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 INTS10Q9NVR2 710 aaKnown RBP17.84■□□□□ 0.45
CAPN1-201ENST00000279247 IL17CQ9P0M4 197 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 SORCS3Q9UPU3 1222 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 A0A1B0GTL3 188 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 SDHDO14521 159 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 VPS26AO75436 327 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 TRIM16O95361 564 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 ENO3P13929 434 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-201ENST00000279247 CES1P23141 567 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 FOXA1P55317 472 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 NAA25Q14CX7 972 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 PITRM1Q5JRX3 1037 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 CTSL3PQ5NE16 218 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 WASHC2DQ5SRD0 308 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 FAM43BQ6ZT52 329 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-201ENST00000279247 MRPL43Q8N983 215 aaKnown RBP17.84■□□□□ 0.45
CAPN1-201ENST00000279247 GIMAP7Q8NHV1 300 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 CCDC126Q96EE4 140 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 ZSWIM3Q96MP5 696 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 BTRCQ9Y297 605 aa17.84■□□□□ 0.45
CAPN1-201ENST00000279247 PIKFYVEQ9Y2I7 2098 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 C9JVG2 144 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 TM7SF2O76062 418 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 BAG2O95816 211 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 UGT2B4P06133 528 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 IMPDH1P20839 514 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 EEF1DP29692 281 aaKnown RBP17.83■□□□□ 0.45
CAPN1-201ENST00000279247 TTPAP49638 278 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 CREMQ03060 361 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 SCIMPQ6UWF3 145 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 ZNF783Q6ZMS7 281 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 RFLNAQ6ZTI6 216 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 HPS6Q86YV9 775 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 SLC22A9Q8IVM8 553 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 DDIASQ8IXT1 998 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 USP13Q92995 863 aaPredicted RBP17.83■□□□□ 0.45
CAPN1-201ENST00000279247 RCN3Q96D15 328 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 PANX3Q96QZ0 392 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 TTC1Q99614 292 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 RETREG1Q9H6L5 497 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 EML4Q9HC35 981 aaKnown RBP17.83■□□□□ 0.45
CAPN1-201ENST00000279247 TRAF6Q9Y4K3 522 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 WASF2Q9Y6W5 498 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 NOTCH4Q99466 2003 aa17.83■□□□□ 0.45
CAPN1-201ENST00000279247 GPC4O75487 556 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 MTHFD2P13995 350 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 ITGAXP20702 1163 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 DNAJB13P59910 316 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 SH3BP2P78314 561 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 FUT11Q495W5 492 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 PTRHD1Q6GMV3 140 aaKnown RBP17.83■□□□□ 0.44
CAPN1-201ENST00000279247 Q6ZVU0 165 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 FBXO39Q8N4B4 442 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 VTI1BQ9UEU0 232 aa17.83■□□□□ 0.44
CAPN1-201ENST00000279247 COPG1Q9Y678 874 aaKnown RBP17.83■□□□□ 0.44
CAPN1-201ENST00000279247 F8W8V4 182 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 GRM6O15303 877 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ECI2O75521 394 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 WISP3O95389 354 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 LATS1O95835 1130 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 IGSF6O95976 241 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 HTRA4P83105 476 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 GK5Q6ZS86 529 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 GALNT7Q86SF2 657 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 C12orf76Q8N812 135 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 CYB5D2Q8WUJ1 264 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ACDQ96AP0 544 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 ASIC4Q96FT7 647 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 SLC45A3Q96JT2 553 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 SYTL2Q9HCH5 934 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 CCDC167Q9P0B6 97 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 TIMM22Q9Y584 194 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 A0A088AWK7 358 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 GFRA2O00451 464 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 FZD6O60353 706 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 PYGLP06737 847 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 SRCP12931 536 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 BMPR1AP36894 532 aa17.82■□□□□ 0.44
CAPN1-201ENST00000279247 PPARGP37231 505 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-201ENST00000279247 AP1S1P61966 158 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms