RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 CD86P42081 329 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 MAPK9P45984 424 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 FASLGP48023 281 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 TAS2R40P59535 323 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 HHEXQ03014 270 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 GBE1Q04446 702 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 NIPAL4Q0D2K0 466 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 NFATC2Q13469 925 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 CCHCR1Q8TD31 782 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.66□□□□□ -0.38
CD44-203ENST00000278386 HDAC11Q96DB2 347 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 TSGA13Q96PP4 275 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 TRIM4Q9C037 500 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 SLC39A1Q9NY26 324 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 IFNKQ9P0W0 207 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 VPS18Q9P253 973 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 UVRAGQ9P2Y5 699 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 KCNK6Q9Y257 313 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 B3GALT1Q9Y5Z6 326 aa12.66□□□□□ -0.38
CD44-203ENST00000278386 OAS3Q9Y6K5 1087 aaKnown RBP12.66□□□□□ -0.38
CD44-203ENST00000278386 TENM4Q6N022 2769 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 A8MU76 341 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 FADS2P1A8MWK0 482 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.65□□□□□ -0.38
CD44-203ENST00000278386 DNAJC6O75061 913 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 EML2O95834 649 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 H2AFZP0C0S5 128 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 SLC2A4P14672 509 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 CASP14P31944 242 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 SPINT3P49223 89 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 RAB15P59190 212 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 RPL26P61254 145 aaKnown RBP12.65□□□□□ -0.38
CD44-203ENST00000278386 NFKB2Q00653 900 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 GALNT3Q14435 633 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 IHHQ14623 411 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 HENMT1Q5T8I9 393 aaKnown RBP12.65□□□□□ -0.38
CD44-203ENST00000278386 TMEM71Q6P5X7 295 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 H2AFVQ71UI9 128 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 NLRP8Q86W28 1048 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 CACNA2D3Q8IZS8 1091 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 SFRP1Q8N474 314 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 PQLC3Q8N755 202 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 ARRDC2Q8TBH0 407 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 HTR3CQ8WXA8 447 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 FATE1Q969F0 183 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 MLPHQ9BV36 600 aaPredicted RBP12.65□□□□□ -0.38
CD44-203ENST00000278386 DDA1Q9BW61 102 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 PACSIN1Q9BY11 444 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 CLMPQ9H6B4 373 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 OCIAD1Q9NX40 245 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 LCMT1Q9UIC8 334 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 RPL26L1Q9UNX3 145 aaKnown RBP12.65□□□□□ -0.38
CD44-203ENST00000278386 PCDHGA3Q9Y5H0 932 aa12.65□□□□□ -0.38
CD44-203ENST00000278386 PCYT1BQ9Y5K3 369 aaPredicted RBP12.65□□□□□ -0.38
CD44-203ENST00000278386 BOD1L1Q8NFC6 3051 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 LRRD1A4D1F6 860 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 KCNK1O00180 336 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 PRLP01236 227 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 JCHAINP01591 159 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 TPM3P06753 285 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 UGT1A3P35503 534 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 ARSDP51689 593 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 AP1B1Q10567 949 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 ZBTB17Q13105 803 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 MESDQ14696 234 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 TBR1Q16650 682 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 QPCTQ16769 361 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 PLA2G4EQ3MJ16 856 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.64□□□□□ -0.39
CD44-203ENST00000278386 DCAF12Q5T6F0 453 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 ALS2CLQ60I27 953 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 ANKS6Q68DC2 871 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 XKR5Q6UX68 686 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 LYSMD3Q7Z3D4 306 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 SLC9B2Q86UD5 537 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 PHYKPLQ8IUZ5 450 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 RAVER1Q8IY67 606 aaKnown RBP12.64□□□□□ -0.39
CD44-203ENST00000278386 NCSTNQ92542 709 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 NKD1Q969G9 470 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 FAF2Q96CS3 445 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 LYSMD1Q96S90 227 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 HERPUD2Q9BSE4 406 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 SPATA16Q9BXB7 569 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 ADGRE3Q9BY15 652 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 CEP41Q9BYV8 373 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 ASPSCR1Q9BZE9 553 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 OSGEPL1Q9H4B0 414 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 FAM83DQ9H4H8 585 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 ARFGAP3Q9NP61 516 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 SARS2Q9NP81 518 aaKnown RBP12.64□□□□□ -0.39
CD44-203ENST00000278386 DTLQ9NZJ0 730 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 TBC1D29Q9UFV1 150 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 KLHL3Q9UH77 587 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 HEY1Q9Y5J3 304 aa12.64□□□□□ -0.39
CD44-203ENST00000278386 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
CD44-203ENST00000278386 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
CD44-203ENST00000278386 B4E171 279 aa12.63□□□□□ -0.39
CD44-203ENST00000278386 ANKRD66B4E2M5 251 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms